Index

A

active (ewoksndreg.transformation.homography.Homography property) (ewoksndreg.transformation.numpy_backend.NumpyHomography property) (ewoksndreg.transformation.scikitimage_backend.SciKitImageHomography property) (ewoksndreg.transformation.scipy_backend.ScipyHomography property) Adam (ewoksndreg.intensities.types.KorniaOptimizerType attribute) add_point() (ewoksndreg.io.output_stack.OutputStack method) (ewoksndreg.io.output_stack.OutputStackHdf5 method) (ewoksndreg.io.output_stack.OutputStackNumpy method) add_points() (ewoksndreg.io.output_stack.OutputStack method) (ewoksndreg.io.output_stack.OutputStackHdf5 method) (ewoksndreg.io.output_stack.OutputStackNumpy method) affine (ewoksndreg.transformation.types.TransformationType attribute) ANTSNeighborhoodCorrelation (ewoksndreg.intensities.types.SitkMetricType attribute) apply_coordinates() (ewoksndreg.transformation.base.Transformation method) (ewoksndreg.transformation.homography.Homography method) (ewoksndreg.transformation.numpy_backend.NumpyHomography method) (ewoksndreg.transformation.scikitimage_backend.SciKitImageHomography method) (ewoksndreg.transformation.scipy_backend.ScipyHomography method) (ewoksndreg.transformation.simpleitk_backend.SimpleITKTransformation method) apply_data() (ewoksndreg.transformation.base.Transformation method) (ewoksndreg.transformation.homography.Homography method) (ewoksndreg.transformation.numpy_backend.NumpyHomography method) (ewoksndreg.transformation.scikitimage_backend.SciKitImageHomography method) (ewoksndreg.transformation.scipy_backend.ScipyHomography method) (ewoksndreg.transformation.simpleitk_backend.SimpleITKTransformation method) apply_transformations() (in module ewoksndreg.transformation.apply) as_parameters() (ewoksndreg.transformation.homography.Homography method) (ewoksndreg.transformation.numpy_backend.NumpyHomography method) (ewoksndreg.transformation.scikitimage_backend.SciKitImageHomography method) (ewoksndreg.transformation.scipy_backend.ScipyHomography method) as_transformations() (in module ewoksndreg.tasks.reg2d_transform)

as_type() (ewoksndreg.features.features.base.Features method) (ewoksndreg.features.features.numpy_backend.NumpyKeypointFeatures method) (ewoksndreg.features.features.scikitimage_backend.SciKitImageDescriptorFeatures method) (ewoksndreg.features.features.silx_backend.SilxDescriptorFeatures method) (ewoksndreg.transformation.base.Transformation method) (ewoksndreg.transformation.homography.Homography method) (ewoksndreg.transformation.numpy_backend.NumpyHomography method) (ewoksndreg.transformation.scikitimage_backend.SciKitImageHomography method) (ewoksndreg.transformation.scipy_backend.ScipyHomography method) (ewoksndreg.transformation.simpleitk_backend.SimpleITKTransformation method) assert_multi_with_qt() (in module ewoksndreg.tests.workflow_tests.test_sp_workflows) assert_multi_without_qt() (in module ewoksndreg.tests.workflow_tests.test_sp_workflows) assert_ready_to_execute() (ewoksndreg.tasks.example2d_stack.Example2DStack method) (ewoksndreg.tasks.fluo_stack.FluoAllStacks method) (ewoksndreg.tasks.fluo_stack.FluoStack method) (ewoksndreg.tasks.id16b_file_read.ID16BFileRead method) (ewoksndreg.tasks.reg2d_features.Reg2DFeatures method) (ewoksndreg.tasks.reg2d_intensities.Reg2DIntensities method) (ewoksndreg.tasks.reg2d_multistack.Reg2DPostEvaluation method) (ewoksndreg.tasks.reg2d_multistack.Reg2DPreEvaluation method) (ewoksndreg.tasks.reg2d_transform.Reg2DTransform method) (ewoksndreg.tasks.select_slice.SelectSlice method) assert_reg2d_features_with_qt() (in module ewoksndreg.tests.tutorials.test_reg2d_features) assert_reg2d_features_without_qt() (in module ewoksndreg.tests.tutorials.test_reg2d_features) assert_reg2d_intensities_with_qt() (in module ewoksndreg.tests.tutorials.test_reg2d_intensities) assert_reg2d_intensities_without_qt() (in module ewoksndreg.tests.tutorials.test_reg2d_intensities) assert_single_with_qt() (in module ewoksndreg.tests.workflow_tests.test_sp_workflows) assert_single_without_qt() (in module ewoksndreg.tests.workflow_tests.test_sp_workflows) assert_workflow_with_qt() (in module ewoksndreg.tests.workflow_tests.test_sitk_workflow) (in module ewoksndreg.tests.workflow_tests.test_strategy) assert_workflow_without_qt() (in module ewoksndreg.tests.workflow_tests.test_sitk_workflow) (in module ewoksndreg.tests.workflow_tests.test_strategy)

B

backend (ewoksndreg.features.detection.base.FeatureDetector.RegistryId attribute) (ewoksndreg.features.detection.scikitimage_backend.SciKitImageCensureFeatureDetector.RegistryId attribute) (ewoksndreg.features.detection.scikitimage_backend.SciKitImageHarrisFeatureDetector.RegistryId attribute) (ewoksndreg.features.detection.scikitimage_backend.SciKitImageOrbFeatureDetector.RegistryId attribute) (ewoksndreg.features.detection.scikitimage_backend.SciKitImageSiftFeatureDetector.RegistryId attribute) (ewoksndreg.features.features.base.Features.RegistryId attribute) (ewoksndreg.features.features.numpy_backend.NumpyKeypointFeatures.RegistryId attribute) (ewoksndreg.features.features.scikitimage_backend.SciKitImageDescriptorFeatures.RegistryId attribute) (ewoksndreg.features.features.silx_backend.SilxDescriptorFeatures.RegistryId attribute) (ewoksndreg.features.mapping.base.FeatureMapping.RegistryId attribute) (ewoksndreg.features.mapping.numpy_backend.NumpyLstSqFeatureMapping.RegistryId attribute) (ewoksndreg.features.mapping.scikitimage_backend.SciKitImageRansacFeatureMapping.RegistryId attribute) (ewoksndreg.features.mapping.scipy_backend.ScipyLstSqFeatureMapping.RegistryId attribute) (ewoksndreg.features.matching.base.FeatureMatching.RegistryId attribute) (ewoksndreg.features.matching.numpy_backend.NumpyKeypointFeatureMatching.RegistryId attribute) (ewoksndreg.features.matching.scikitimage_backend.SciKitImageDescriptorFeatureMatching.RegistryId attribute) (ewoksndreg.features.matching.silx_backend.SilxDescriptorFeatureMatching.RegistryId attribute) (ewoksndreg.intensities.base.IntensityMapping.RegistryId attribute) (ewoksndreg.intensities.kornia_backend.KorniaOptimizationIntensityMapping.RegistryId attribute) (ewoksndreg.intensities.numpy_backend.NumpyCrossCorrelationIntensityMapping.RegistryId attribute) (ewoksndreg.intensities.scikitimage_backend.SkimageCorrelationIntensityMapping.RegistryId attribute) (ewoksndreg.intensities.simpleitk_backend.sitkOptimizerIntesityMapping.RegistryId attribute) (ewoksndreg.registry.Registered.RegistryId attribute) (ewoksndreg.registry.RegistryId attribute) (ewoksndreg.transformation.base.Transformation.RegistryId attribute) (ewoksndreg.transformation.homography.Homography.RegistryId attribute) (ewoksndreg.transformation.numpy_backend.NumpyHomography.RegistryId attribute) (ewoksndreg.transformation.scikitimage_backend.SciKitImageHomography.RegistryId attribute) (ewoksndreg.transformation.scipy_backend.ScipyHomography.RegistryId attribute) (ewoksndreg.transformation.simpleitk_backend.SimpleITKTransformation.RegistryId attribute)

barthann (ewoksndreg.math.filter.WindowType attribute) bartlett (ewoksndreg.math.filter.WindowType attribute) blackman (ewoksndreg.math.filter.WindowType attribute) blackmanharris (ewoksndreg.math.filter.WindowType attribute) block_kernel() (in module ewoksndreg.intensities.torch_metrics) bohman (ewoksndreg.math.filter.WindowType attribute) boxcar (ewoksndreg.math.filter.WindowType attribute) bspline (ewoksndreg.transformation.types.TransformationType attribute)

C

calc_affine() (in module ewoksndreg.transformation.lstsq) calc_identity() (in module ewoksndreg.transformation.lstsq) calc_NaN_edges() (in module ewoksndreg.math.crop) calc_projective() (in module ewoksndreg.transformation.lstsq) calc_rigid() (in module ewoksndreg.transformation.lstsq) calc_similarity() (in module ewoksndreg.transformation.lstsq) calc_translation() (in module ewoksndreg.transformation.lstsq) calculate() (ewoksndreg.features.mapping.base.FeatureMapping method) (ewoksndreg.features.mapping.numpy_backend.NumpyLstSqFeatureMapping method) (ewoksndreg.features.mapping.scikitimage_backend.SciKitImageRansacFeatureMapping method) (ewoksndreg.features.mapping.scipy_backend.ScipyLstSqFeatureMapping method) (ewoksndreg.intensities.base.IntensityMapping method) (ewoksndreg.intensities.kornia_backend.KorniaOptimizationIntensityMapping method) (ewoksndreg.intensities.numpy_backend.NumpyCrossCorrelationIntensityMapping method) (ewoksndreg.intensities.scikitimage_backend.SkimageCorrelationIntensityMapping method) (ewoksndreg.intensities.simpleitk_backend.sitkOptimizerIntesityMapping method) calculate_exclusions() (in module ewoksndreg.tests.data.data_from_h5) calculate_transformations() (in module ewoksndreg.features.registration) (in module ewoksndreg.intensities.registration) cancel() (ewoksndreg.tasks.example2d_stack.Example2DStack method) (ewoksndreg.tasks.fluo_stack.FluoAllStacks method) (ewoksndreg.tasks.fluo_stack.FluoStack method) (ewoksndreg.tasks.id16b_file_read.ID16BFileRead method) (ewoksndreg.tasks.reg2d_features.Reg2DFeatures method) (ewoksndreg.tasks.reg2d_intensities.Reg2DIntensities method) (ewoksndreg.tasks.reg2d_multistack.Reg2DPostEvaluation method) (ewoksndreg.tasks.reg2d_multistack.Reg2DPreEvaluation method) (ewoksndreg.tasks.reg2d_transform.Reg2DTransform method) (ewoksndreg.tasks.select_slice.SelectSlice method) cancelled (ewoksndreg.tasks.example2d_stack.Example2DStack property) (ewoksndreg.tasks.fluo_stack.FluoAllStacks property) (ewoksndreg.tasks.fluo_stack.FluoStack property) (ewoksndreg.tasks.id16b_file_read.ID16BFileRead property) (ewoksndreg.tasks.reg2d_features.Reg2DFeatures property) (ewoksndreg.tasks.reg2d_intensities.Reg2DIntensities property) (ewoksndreg.tasks.reg2d_multistack.Reg2DPostEvaluation property) (ewoksndreg.tasks.reg2d_multistack.Reg2DPreEvaluation property) (ewoksndreg.tasks.reg2d_transform.Reg2DTransform property) (ewoksndreg.tasks.select_slice.SelectSlice property) cc_maximum() (in module ewoksndreg.intensities.numpy_backend) centroid() (in module ewoksndreg.transformation.lstsq) CGLineSearch (ewoksndreg.intensities.types.SitkOptimizerType attribute) class_nonce() (ewoksndreg.tasks.example2d_stack.Example2DStack class method) (ewoksndreg.tasks.fluo_stack.FluoAllStacks class method) (ewoksndreg.tasks.fluo_stack.FluoStack class method) (ewoksndreg.tasks.id16b_file_read.ID16BFileRead class method) (ewoksndreg.tasks.reg2d_features.Reg2DFeatures class method) (ewoksndreg.tasks.reg2d_intensities.Reg2DIntensities class method) (ewoksndreg.tasks.reg2d_multistack.Reg2DPostEvaluation class method) (ewoksndreg.tasks.reg2d_multistack.Reg2DPreEvaluation class method) (ewoksndreg.tasks.reg2d_transform.Reg2DTransform class method) (ewoksndreg.tasks.select_slice.SelectSlice class method) class_nonce_data() (ewoksndreg.tasks.example2d_stack.Example2DStack class method) (ewoksndreg.tasks.fluo_stack.FluoAllStacks class method) (ewoksndreg.tasks.fluo_stack.FluoStack class method) (ewoksndreg.tasks.id16b_file_read.ID16BFileRead class method) (ewoksndreg.tasks.reg2d_features.Reg2DFeatures class method) (ewoksndreg.tasks.reg2d_intensities.Reg2DIntensities class method) (ewoksndreg.tasks.reg2d_multistack.Reg2DPostEvaluation class method) (ewoksndreg.tasks.reg2d_multistack.Reg2DPreEvaluation class method) (ewoksndreg.tasks.reg2d_transform.Reg2DTransform class method) (ewoksndreg.tasks.select_slice.SelectSlice class method) class_registry_name() (ewoksndreg.tasks.example2d_stack.Example2DStack class method) (ewoksndreg.tasks.fluo_stack.FluoAllStacks class method) (ewoksndreg.tasks.fluo_stack.FluoStack class method) (ewoksndreg.tasks.id16b_file_read.ID16BFileRead class method) (ewoksndreg.tasks.reg2d_features.Reg2DFeatures class method) (ewoksndreg.tasks.reg2d_intensities.Reg2DIntensities class method) (ewoksndreg.tasks.reg2d_multistack.Reg2DPostEvaluation class method) (ewoksndreg.tasks.reg2d_multistack.Reg2DPreEvaluation class method) (ewoksndreg.tasks.reg2d_transform.Reg2DTransform class method) (ewoksndreg.tasks.select_slice.SelectSlice class method)

cleanup_references() (ewoksndreg.tasks.example2d_stack.Example2DStack method) (ewoksndreg.tasks.fluo_stack.FluoAllStacks method) (ewoksndreg.tasks.fluo_stack.FluoStack method) (ewoksndreg.tasks.id16b_file_read.ID16BFileRead method) (ewoksndreg.tasks.reg2d_features.Reg2DFeatures method) (ewoksndreg.tasks.reg2d_intensities.Reg2DIntensities method) (ewoksndreg.tasks.reg2d_multistack.Reg2DPostEvaluation method) (ewoksndreg.tasks.reg2d_multistack.Reg2DPreEvaluation method) (ewoksndreg.tasks.reg2d_transform.Reg2DTransform method) (ewoksndreg.tasks.select_slice.SelectSlice method) composite (ewoksndreg.transformation.types.TransformationType attribute) coordinates (ewoksndreg.features.features.base.Features property) (ewoksndreg.features.features.numpy_backend.NumpyKeypointFeatures property) (ewoksndreg.features.features.scikitimage_backend.SciKitImageDescriptorFeatures property) (ewoksndreg.features.features.silx_backend.SilxDescriptorFeatures property) cor_from_cov() (in module ewoksndreg.math.fit1d) cosine (ewoksndreg.math.filter.WindowType attribute) count() (ewoksndreg.features.detection.base.FeatureDetector.RegistryId method) (ewoksndreg.features.detection.scikitimage_backend.SciKitImageCensureFeatureDetector.RegistryId method) (ewoksndreg.features.detection.scikitimage_backend.SciKitImageHarrisFeatureDetector.RegistryId method) (ewoksndreg.features.detection.scikitimage_backend.SciKitImageOrbFeatureDetector.RegistryId method) (ewoksndreg.features.detection.scikitimage_backend.SciKitImageSiftFeatureDetector.RegistryId method) (ewoksndreg.features.features.base.Features method) (ewoksndreg.features.features.base.Features.RegistryId method) (ewoksndreg.features.features.numpy_backend.NumpyKeypointFeatures method) (ewoksndreg.features.features.numpy_backend.NumpyKeypointFeatures.RegistryId method) (ewoksndreg.features.features.scikitimage_backend.SciKitImageDescriptorFeatures method) (ewoksndreg.features.features.scikitimage_backend.SciKitImageDescriptorFeatures.RegistryId method) (ewoksndreg.features.features.silx_backend.SilxDescriptorFeatures method) (ewoksndreg.features.features.silx_backend.SilxDescriptorFeatures.RegistryId method) (ewoksndreg.features.mapping.base.FeatureMapping.RegistryId method) (ewoksndreg.features.mapping.numpy_backend.NumpyLstSqFeatureMapping.RegistryId method) (ewoksndreg.features.mapping.scikitimage_backend.SciKitImageRansacFeatureMapping.RegistryId method) (ewoksndreg.features.mapping.scipy_backend.ScipyLstSqFeatureMapping.RegistryId method) (ewoksndreg.features.matching.base.FeatureMatching.RegistryId method) (ewoksndreg.features.matching.numpy_backend.NumpyKeypointFeatureMatching.RegistryId method) (ewoksndreg.features.matching.scikitimage_backend.SciKitImageDescriptorFeatureMatching.RegistryId method) (ewoksndreg.features.matching.silx_backend.SilxDescriptorFeatureMatching.RegistryId method) (ewoksndreg.intensities.base.IntensityMapping.RegistryId method) (ewoksndreg.intensities.kornia_backend.KorniaOptimizationIntensityMapping.RegistryId method) (ewoksndreg.intensities.numpy_backend.NumpyCrossCorrelationIntensityMapping.RegistryId method) (ewoksndreg.intensities.scikitimage_backend.SkimageCorrelationIntensityMapping.RegistryId method) (ewoksndreg.intensities.simpleitk_backend.sitkOptimizerIntesityMapping.RegistryId method) (ewoksndreg.io.input_stack.InputStack method) (ewoksndreg.io.input_stack.InputStackHdf5 method) (ewoksndreg.io.input_stack.InputStackNumpy method) (ewoksndreg.registry.Registered.RegistryId method) (ewoksndreg.registry.RegistryId method) (ewoksndreg.transformation.base.Transformation.RegistryId method) (ewoksndreg.transformation.homography.Homography.RegistryId method) (ewoksndreg.transformation.numpy_backend.NumpyHomography.RegistryId method) (ewoksndreg.transformation.scikitimage_backend.SciKitImageHomography.RegistryId method) (ewoksndreg.transformation.scipy_backend.ScipyHomography.RegistryId method) (ewoksndreg.transformation.simpleitk_backend.SimpleITKTransformation.RegistryId method) crop_edges() (in module ewoksndreg.math.crop) crop_stack() (in module ewoksndreg.math.crop) crop_translations() (in module ewoksndreg.math.crop) CrossCorrelation (ewoksndreg.intensities.types.SitkMetricType attribute)

D

data (ewoksndreg.io.output_stack.OutputStackNumpy property) detect_features() (in module ewoksndreg.features.registration) determine_shift() (in module ewoksndreg.intensities.numpy_backend) dimensionality (ewoksndreg.transformation.scikitimage_backend.ShiftTransform property) displacement_field (ewoksndreg.transformation.simpleitk_backend.SimpleITKTransformation property) (ewoksndreg.transformation.types.TransformationType attribute) done (ewoksndreg.tasks.example2d_stack.Example2DStack property) (ewoksndreg.tasks.fluo_stack.FluoAllStacks property) (ewoksndreg.tasks.fluo_stack.FluoStack property) (ewoksndreg.tasks.id16b_file_read.ID16BFileRead property) (ewoksndreg.tasks.reg2d_features.Reg2DFeatures property) (ewoksndreg.tasks.reg2d_intensities.Reg2DIntensities property) (ewoksndreg.tasks.reg2d_multistack.Reg2DPostEvaluation property) (ewoksndreg.tasks.reg2d_multistack.Reg2DPreEvaluation property) (ewoksndreg.tasks.reg2d_transform.Reg2DTransform property) (ewoksndreg.tasks.select_slice.SelectSlice property)

dtype (ewoksndreg.io.input_stack.InputStack property) (ewoksndreg.io.input_stack.InputStackHdf5 property) (ewoksndreg.io.input_stack.InputStackNumpy property)

E

errorf_gaussian() (in module ewoksndreg.math.fit2d) estimate() (ewoksndreg.transformation.scikitimage_backend.ShiftTransform method) Evolutionary (ewoksndreg.intensities.types.SitkOptimizerType attribute) ewoks_orange_canvas() (in module ewoksndreg.tests.conftest) ewoksndreg module ewoksndreg.evaluation module ewoksndreg.evaluation.eval_metrics module ewoksndreg.evaluation.evaluation module ewoksndreg.features module ewoksndreg.features.detection module ewoksndreg.features.detection.base module ewoksndreg.features.detection.scikitimage_backend module ewoksndreg.features.detection.silx_backend module ewoksndreg.features.features module ewoksndreg.features.features.base module ewoksndreg.features.features.numpy_backend module ewoksndreg.features.features.scikitimage_backend module ewoksndreg.features.features.silx_backend module ewoksndreg.features.mapping module ewoksndreg.features.mapping.base module ewoksndreg.features.mapping.lstsq module ewoksndreg.features.mapping.numpy_backend module ewoksndreg.features.mapping.scikitimage_backend module ewoksndreg.features.mapping.scipy_backend module ewoksndreg.features.matching module ewoksndreg.features.matching.base module ewoksndreg.features.matching.numpy_backend module ewoksndreg.features.matching.scikitimage_backend module ewoksndreg.features.matching.silx_backend module ewoksndreg.features.registration module ewoksndreg.intensities module ewoksndreg.intensities.base module ewoksndreg.intensities.kornia_backend module ewoksndreg.intensities.metrics module ewoksndreg.intensities.numpy_backend module ewoksndreg.intensities.registration module ewoksndreg.intensities.scikitimage_backend module ewoksndreg.intensities.simpleitk_backend module ewoksndreg.intensities.torch_metrics module ewoksndreg.intensities.types module ewoksndreg.io module ewoksndreg.io.input_stack module ewoksndreg.io.output_stack module ewoksndreg.math module ewoksndreg.math.center module ewoksndreg.math.crop module ewoksndreg.math.fft module ewoksndreg.math.filter module ewoksndreg.math.fit1d module ewoksndreg.math.fit2d module ewoksndreg.math.normalization module ewoksndreg.registry module ewoksndreg.tasks module ewoksndreg.tasks.example2d_stack module ewoksndreg.tasks.fluo_stack module ewoksndreg.tasks.id16b_file_read module ewoksndreg.tasks.reg2d_features module ewoksndreg.tasks.reg2d_intensities module ewoksndreg.tasks.reg2d_multistack module

ewoksndreg.tasks.reg2d_transform module ewoksndreg.tasks.select_slice module ewoksndreg.tests module ewoksndreg.tests.conftest module ewoksndreg.tests.data module ewoksndreg.tests.data.data_for_registration module ewoksndreg.tests.data.data_from_h5 module ewoksndreg.tests.data.read module ewoksndreg.tests.math module ewoksndreg.tests.math.test_fft module ewoksndreg.tests.math.test_fit1d module ewoksndreg.tests.math.test_fit2d module ewoksndreg.tests.test_crop module ewoksndreg.tests.test_data module ewoksndreg.tests.test_evaluation module ewoksndreg.tests.test_feature_registration module ewoksndreg.tests.test_intensity_registration module ewoksndreg.tests.test_mapping_solvers module ewoksndreg.tests.test_match_numpy module ewoksndreg.tests.test_nmi_loss module ewoksndreg.tests.test_stack_io module ewoksndreg.tests.test_tasks module ewoksndreg.tests.test_transformation_apply module ewoksndreg.tests.test_transformation_numpy module ewoksndreg.tests.test_transformation_parameter module ewoksndreg.tests.test_transformation_types module ewoksndreg.tests.tutorials module ewoksndreg.tests.tutorials.test_reg2d_features module ewoksndreg.tests.tutorials.test_reg2d_intensities module ewoksndreg.tests.workflow_tests module ewoksndreg.tests.workflow_tests.test_sitk_workflow module ewoksndreg.tests.workflow_tests.test_sp_workflows module ewoksndreg.tests.workflow_tests.test_strategy module ewoksndreg.tests.workflow_tests.workflows module ewoksndreg.transformation module ewoksndreg.transformation.apply module ewoksndreg.transformation.base module ewoksndreg.transformation.homography module ewoksndreg.transformation.lstsq module ewoksndreg.transformation.numpy_backend module ewoksndreg.transformation.scikitimage_backend module ewoksndreg.transformation.scipy_backend module ewoksndreg.transformation.simpleitk_backend module ewoksndreg.transformation.transform module ewoksndreg.transformation.types module Example2DStack (class in ewoksndreg.tasks.example2d_stack) exception (ewoksndreg.tasks.example2d_stack.Example2DStack property) (ewoksndreg.tasks.fluo_stack.FluoAllStacks property) (ewoksndreg.tasks.fluo_stack.FluoStack property) (ewoksndreg.tasks.id16b_file_read.ID16BFileRead property) (ewoksndreg.tasks.reg2d_features.Reg2DFeatures property) (ewoksndreg.tasks.reg2d_intensities.Reg2DIntensities property) (ewoksndreg.tasks.reg2d_multistack.Reg2DPostEvaluation property) (ewoksndreg.tasks.reg2d_multistack.Reg2DPreEvaluation property) (ewoksndreg.tasks.reg2d_transform.Reg2DTransform property) (ewoksndreg.tasks.select_slice.SelectSlice property) execute() (ewoksndreg.tasks.example2d_stack.Example2DStack method) (ewoksndreg.tasks.fluo_stack.FluoAllStacks method) (ewoksndreg.tasks.fluo_stack.FluoStack method) (ewoksndreg.tasks.id16b_file_read.ID16BFileRead method) (ewoksndreg.tasks.reg2d_features.Reg2DFeatures method) (ewoksndreg.tasks.reg2d_intensities.Reg2DIntensities method) (ewoksndreg.tasks.reg2d_multistack.Reg2DPostEvaluation method) (ewoksndreg.tasks.reg2d_multistack.Reg2DPreEvaluation method) (ewoksndreg.tasks.reg2d_transform.Reg2DTransform method) (ewoksndreg.tasks.select_slice.SelectSlice method) Exhaustive (ewoksndreg.intensities.types.SitkOptimizerType attribute) exponential (ewoksndreg.math.filter.WindowType attribute)

F

factory() (ewoksndreg.features.detection.base.FeatureDetector.RegistryId class method) (ewoksndreg.features.detection.scikitimage_backend.SciKitImageCensureFeatureDetector.RegistryId class method) (ewoksndreg.features.detection.scikitimage_backend.SciKitImageHarrisFeatureDetector.RegistryId class method) (ewoksndreg.features.detection.scikitimage_backend.SciKitImageOrbFeatureDetector.RegistryId class method) (ewoksndreg.features.detection.scikitimage_backend.SciKitImageSiftFeatureDetector.RegistryId class method) (ewoksndreg.features.features.base.Features.RegistryId class method) (ewoksndreg.features.features.numpy_backend.NumpyKeypointFeatures.RegistryId class method) (ewoksndreg.features.features.scikitimage_backend.SciKitImageDescriptorFeatures.RegistryId class method) (ewoksndreg.features.features.silx_backend.SilxDescriptorFeatures.RegistryId class method) (ewoksndreg.features.mapping.base.FeatureMapping.RegistryId class method) (ewoksndreg.features.mapping.numpy_backend.NumpyLstSqFeatureMapping.RegistryId class method) (ewoksndreg.features.mapping.scikitimage_backend.SciKitImageRansacFeatureMapping.RegistryId class method) (ewoksndreg.features.mapping.scipy_backend.ScipyLstSqFeatureMapping.RegistryId class method) (ewoksndreg.features.matching.base.FeatureMatching.RegistryId class method) (ewoksndreg.features.matching.numpy_backend.NumpyKeypointFeatureMatching.RegistryId class method) (ewoksndreg.features.matching.scikitimage_backend.SciKitImageDescriptorFeatureMatching.RegistryId class method) (ewoksndreg.features.matching.silx_backend.SilxDescriptorFeatureMatching.RegistryId class method) (ewoksndreg.intensities.base.IntensityMapping.RegistryId class method) (ewoksndreg.intensities.kornia_backend.KorniaOptimizationIntensityMapping.RegistryId class method) (ewoksndreg.intensities.numpy_backend.NumpyCrossCorrelationIntensityMapping.RegistryId class method) (ewoksndreg.intensities.scikitimage_backend.SkimageCorrelationIntensityMapping.RegistryId class method) (ewoksndreg.intensities.simpleitk_backend.sitkOptimizerIntesityMapping.RegistryId class method) (ewoksndreg.registry.Registered.RegistryId class method) (ewoksndreg.registry.RegistryId class method) (ewoksndreg.transformation.base.Transformation.RegistryId class method) (ewoksndreg.transformation.homography.Homography.RegistryId class method) (ewoksndreg.transformation.numpy_backend.NumpyHomography.RegistryId class method) (ewoksndreg.transformation.scikitimage_backend.SciKitImageHomography.RegistryId class method) (ewoksndreg.transformation.scipy_backend.ScipyHomography.RegistryId class method) (ewoksndreg.transformation.simpleitk_backend.SimpleITKTransformation.RegistryId class method) failed (ewoksndreg.tasks.example2d_stack.Example2DStack property) (ewoksndreg.tasks.fluo_stack.FluoAllStacks property) (ewoksndreg.tasks.fluo_stack.FluoStack property) (ewoksndreg.tasks.id16b_file_read.ID16BFileRead property) (ewoksndreg.tasks.reg2d_features.Reg2DFeatures property) (ewoksndreg.tasks.reg2d_intensities.Reg2DIntensities property) (ewoksndreg.tasks.reg2d_multistack.Reg2DPostEvaluation property) (ewoksndreg.tasks.reg2d_multistack.Reg2DPreEvaluation property) (ewoksndreg.tasks.reg2d_transform.Reg2DTransform property) (ewoksndreg.tasks.select_slice.SelectSlice property) fcentroid() (in module ewoksndreg.math.center)

FeatureDetector (class in ewoksndreg.features.detection.base) FeatureDetector.RegistryId (class in ewoksndreg.features.detection.base) FeatureMapping (class in ewoksndreg.features.mapping.base) FeatureMapping.RegistryId (class in ewoksndreg.features.mapping.base) FeatureMatching (class in ewoksndreg.features.matching.base) FeatureMatching.RegistryId (class in ewoksndreg.features.matching.base) Features (class in ewoksndreg.features.features.base) Features.RegistryId (class in ewoksndreg.features.features.base) fft() (in module ewoksndreg.math.fft) fft1() (in module ewoksndreg.math.fft) fft2() (in module ewoksndreg.math.fft) fft_freqind() (in module ewoksndreg.math.fft) fftConvention (class in ewoksndreg.math.fft) fftfreq() (in module ewoksndreg.math.fft) fftshift() (in module ewoksndreg.math.fft) fgaussmax() (in module ewoksndreg.math.center) FilterType (class in ewoksndreg.math.filter) find() (ewoksndreg.features.detection.base.FeatureDetector method) (ewoksndreg.features.detection.scikitimage_backend.SciKitImageCensureFeatureDetector method) (ewoksndreg.features.detection.scikitimage_backend.SciKitImageHarrisFeatureDetector method) (ewoksndreg.features.detection.scikitimage_backend.SciKitImageOrbFeatureDetector method) (ewoksndreg.features.detection.scikitimage_backend.SciKitImageSiftFeatureDetector method) fitgaussian() (in module ewoksndreg.math.fit1d) (in module ewoksndreg.math.fit2d) fix_uhash() (ewoksndreg.tasks.example2d_stack.Example2DStack method) (ewoksndreg.tasks.fluo_stack.FluoAllStacks method) (ewoksndreg.tasks.fluo_stack.FluoStack method) (ewoksndreg.tasks.id16b_file_read.ID16BFileRead method) (ewoksndreg.tasks.reg2d_features.Reg2DFeatures method) (ewoksndreg.tasks.reg2d_intensities.Reg2DIntensities method) (ewoksndreg.tasks.reg2d_multistack.Reg2DPostEvaluation method) (ewoksndreg.tasks.reg2d_multistack.Reg2DPreEvaluation method) (ewoksndreg.tasks.reg2d_transform.Reg2DTransform method) (ewoksndreg.tasks.select_slice.SelectSlice method) flattop (ewoksndreg.math.filter.WindowType attribute) FluoAllStacks (class in ewoksndreg.tasks.fluo_stack) FluoStack (class in ewoksndreg.tasks.fluo_stack) fmax() (in module ewoksndreg.math.center) fmin() (in module ewoksndreg.math.center) foptimize() (in module ewoksndreg.math.center) ftmodulus() (in module ewoksndreg.intensities.numpy_backend)

G

gaussian (ewoksndreg.math.filter.FilterType attribute) gaussian() (in module ewoksndreg.math.fit1d) (in module ewoksndreg.math.fit2d) get_all_stacks() (in module ewoksndreg.tests.data.data_from_h5) get_bspline() (in module ewoksndreg.tests.data.data_for_registration) get_deformations() (in module ewoksndreg.tests.data.data_for_registration) get_expected_outputs() (in module ewoksndreg.tests.tutorials.test_reg2d_features) (in module ewoksndreg.tests.tutorials.test_reg2d_intensities) get_identity() (ewoksndreg.transformation.simpleitk_backend.SimpleITKTransformation method) get_input_uhashes() (ewoksndreg.tasks.example2d_stack.Example2DStack method) (ewoksndreg.tasks.fluo_stack.FluoAllStacks method) (ewoksndreg.tasks.fluo_stack.FluoStack method) (ewoksndreg.tasks.id16b_file_read.ID16BFileRead method) (ewoksndreg.tasks.reg2d_features.Reg2DFeatures method) (ewoksndreg.tasks.reg2d_intensities.Reg2DIntensities method) (ewoksndreg.tasks.reg2d_multistack.Reg2DPostEvaluation method) (ewoksndreg.tasks.reg2d_multistack.Reg2DPreEvaluation method) (ewoksndreg.tasks.reg2d_transform.Reg2DTransform method) (ewoksndreg.tasks.select_slice.SelectSlice method) get_input_value() (ewoksndreg.tasks.example2d_stack.Example2DStack method) (ewoksndreg.tasks.fluo_stack.FluoAllStacks method) (ewoksndreg.tasks.fluo_stack.FluoStack method) (ewoksndreg.tasks.id16b_file_read.ID16BFileRead method) (ewoksndreg.tasks.reg2d_features.Reg2DFeatures method) (ewoksndreg.tasks.reg2d_intensities.Reg2DIntensities method) (ewoksndreg.tasks.reg2d_multistack.Reg2DPostEvaluation method) (ewoksndreg.tasks.reg2d_multistack.Reg2DPreEvaluation method) (ewoksndreg.tasks.reg2d_transform.Reg2DTransform method) (ewoksndreg.tasks.select_slice.SelectSlice method) get_input_values() (ewoksndreg.tasks.example2d_stack.Example2DStack method) (ewoksndreg.tasks.fluo_stack.FluoAllStacks method) (ewoksndreg.tasks.fluo_stack.FluoStack method) (ewoksndreg.tasks.id16b_file_read.ID16BFileRead method) (ewoksndreg.tasks.reg2d_features.Reg2DFeatures method) (ewoksndreg.tasks.reg2d_intensities.Reg2DIntensities method) (ewoksndreg.tasks.reg2d_multistack.Reg2DPostEvaluation method) (ewoksndreg.tasks.reg2d_multistack.Reg2DPreEvaluation method) (ewoksndreg.tasks.reg2d_transform.Reg2DTransform method) (ewoksndreg.tasks.select_slice.SelectSlice method) get_inputs() (in module ewoksndreg.tests.tutorials.test_reg2d_features) (in module ewoksndreg.tests.tutorials.test_reg2d_intensities) (in module ewoksndreg.tests.workflow_tests.test_sitk_workflow) (in module ewoksndreg.tests.workflow_tests.test_strategy) get_lstsq_solver() (in module ewoksndreg.features.mapping.lstsq) get_named_input_values() (ewoksndreg.tasks.example2d_stack.Example2DStack method) (ewoksndreg.tasks.fluo_stack.FluoAllStacks method) (ewoksndreg.tasks.fluo_stack.FluoStack method) (ewoksndreg.tasks.id16b_file_read.ID16BFileRead method) (ewoksndreg.tasks.reg2d_features.Reg2DFeatures method) (ewoksndreg.tasks.reg2d_intensities.Reg2DIntensities method) (ewoksndreg.tasks.reg2d_multistack.Reg2DPostEvaluation method) (ewoksndreg.tasks.reg2d_multistack.Reg2DPreEvaluation method) (ewoksndreg.tasks.reg2d_transform.Reg2DTransform method) (ewoksndreg.tasks.select_slice.SelectSlice method) get_output_transfer_data() (ewoksndreg.tasks.example2d_stack.Example2DStack method) (ewoksndreg.tasks.fluo_stack.FluoAllStacks method) (ewoksndreg.tasks.fluo_stack.FluoStack method) (ewoksndreg.tasks.id16b_file_read.ID16BFileRead method) (ewoksndreg.tasks.reg2d_features.Reg2DFeatures method) (ewoksndreg.tasks.reg2d_intensities.Reg2DIntensities method) (ewoksndreg.tasks.reg2d_multistack.Reg2DPostEvaluation method) (ewoksndreg.tasks.reg2d_multistack.Reg2DPreEvaluation method) (ewoksndreg.tasks.reg2d_transform.Reg2DTransform method) (ewoksndreg.tasks.select_slice.SelectSlice method) get_output_uhashes() (ewoksndreg.tasks.example2d_stack.Example2DStack method) (ewoksndreg.tasks.fluo_stack.FluoAllStacks method) (ewoksndreg.tasks.fluo_stack.FluoStack method) (ewoksndreg.tasks.id16b_file_read.ID16BFileRead method) (ewoksndreg.tasks.reg2d_features.Reg2DFeatures method) (ewoksndreg.tasks.reg2d_intensities.Reg2DIntensities method) (ewoksndreg.tasks.reg2d_multistack.Reg2DPostEvaluation method) (ewoksndreg.tasks.reg2d_multistack.Reg2DPreEvaluation method) (ewoksndreg.tasks.reg2d_transform.Reg2DTransform method) (ewoksndreg.tasks.select_slice.SelectSlice method) get_output_value() (ewoksndreg.tasks.example2d_stack.Example2DStack method) (ewoksndreg.tasks.fluo_stack.FluoAllStacks method) (ewoksndreg.tasks.fluo_stack.FluoStack method) (ewoksndreg.tasks.id16b_file_read.ID16BFileRead method) (ewoksndreg.tasks.reg2d_features.Reg2DFeatures method) (ewoksndreg.tasks.reg2d_intensities.Reg2DIntensities method) (ewoksndreg.tasks.reg2d_multistack.Reg2DPostEvaluation method) (ewoksndreg.tasks.reg2d_multistack.Reg2DPreEvaluation method) (ewoksndreg.tasks.reg2d_transform.Reg2DTransform method) (ewoksndreg.tasks.select_slice.SelectSlice method) get_output_values() (ewoksndreg.tasks.example2d_stack.Example2DStack method) (ewoksndreg.tasks.fluo_stack.FluoAllStacks method) (ewoksndreg.tasks.fluo_stack.FluoStack method) (ewoksndreg.tasks.id16b_file_read.ID16BFileRead method) (ewoksndreg.tasks.reg2d_features.Reg2DFeatures method) (ewoksndreg.tasks.reg2d_intensities.Reg2DIntensities method) (ewoksndreg.tasks.reg2d_multistack.Reg2DPostEvaluation method) (ewoksndreg.tasks.reg2d_multistack.Reg2DPreEvaluation method) (ewoksndreg.tasks.reg2d_transform.Reg2DTransform method) (ewoksndreg.tasks.select_slice.SelectSlice method) get_positional_input_values() (ewoksndreg.tasks.example2d_stack.Example2DStack method) (ewoksndreg.tasks.fluo_stack.FluoAllStacks method) (ewoksndreg.tasks.fluo_stack.FluoStack method) (ewoksndreg.tasks.id16b_file_read.ID16BFileRead method) (ewoksndreg.tasks.reg2d_features.Reg2DFeatures method) (ewoksndreg.tasks.reg2d_intensities.Reg2DIntensities method) (ewoksndreg.tasks.reg2d_multistack.Reg2DPostEvaluation method) (ewoksndreg.tasks.reg2d_multistack.Reg2DPreEvaluation method) (ewoksndreg.tasks.reg2d_transform.Reg2DTransform method) (ewoksndreg.tasks.select_slice.SelectSlice method) get_ransac_solver() (in module ewoksndreg.features.mapping.scikitimage_backend) get_stack() (in module ewoksndreg.tests.data.data_from_h5) get_stack_dict() (in module ewoksndreg.tests.data.data_from_h5) get_subclass() (ewoksndreg.features.detection.base.FeatureDetector class method) (ewoksndreg.features.detection.scikitimage_backend.SciKitImageCensureFeatureDetector class method) (ewoksndreg.features.detection.scikitimage_backend.SciKitImageHarrisFeatureDetector class method) (ewoksndreg.features.detection.scikitimage_backend.SciKitImageOrbFeatureDetector class method) (ewoksndreg.features.detection.scikitimage_backend.SciKitImageSiftFeatureDetector class method) (ewoksndreg.features.features.base.Features class method) (ewoksndreg.features.features.numpy_backend.NumpyKeypointFeatures class method) (ewoksndreg.features.features.scikitimage_backend.SciKitImageDescriptorFeatures class method) (ewoksndreg.features.features.silx_backend.SilxDescriptorFeatures class method) (ewoksndreg.features.mapping.base.FeatureMapping class method) (ewoksndreg.features.mapping.numpy_backend.NumpyLstSqFeatureMapping class method) (ewoksndreg.features.mapping.scikitimage_backend.SciKitImageRansacFeatureMapping class method) (ewoksndreg.features.mapping.scipy_backend.ScipyLstSqFeatureMapping class method) (ewoksndreg.features.matching.base.FeatureMatching class method) (ewoksndreg.features.matching.numpy_backend.NumpyKeypointFeatureMatching class method) (ewoksndreg.features.matching.scikitimage_backend.SciKitImageDescriptorFeatureMatching class method) (ewoksndreg.features.matching.silx_backend.SilxDescriptorFeatureMatching class method) (ewoksndreg.intensities.base.IntensityMapping class method) (ewoksndreg.intensities.kornia_backend.KorniaOptimizationIntensityMapping class method) (ewoksndreg.intensities.numpy_backend.NumpyCrossCorrelationIntensityMapping class method) (ewoksndreg.intensities.scikitimage_backend.SkimageCorrelationIntensityMapping class method) (ewoksndreg.intensities.simpleitk_backend.sitkOptimizerIntesityMapping class method) (ewoksndreg.registry.Registered class method) (ewoksndreg.tasks.example2d_stack.Example2DStack class method) (ewoksndreg.tasks.fluo_stack.FluoAllStacks class method) (ewoksndreg.tasks.fluo_stack.FluoStack class method) (ewoksndreg.tasks.id16b_file_read.ID16BFileRead class method) (ewoksndreg.tasks.reg2d_features.Reg2DFeatures class method) (ewoksndreg.tasks.reg2d_intensities.Reg2DIntensities class method) (ewoksndreg.tasks.reg2d_multistack.Reg2DPostEvaluation class method) (ewoksndreg.tasks.reg2d_multistack.Reg2DPreEvaluation class method) (ewoksndreg.tasks.reg2d_transform.Reg2DTransform class method) (ewoksndreg.tasks.select_slice.SelectSlice class method) (ewoksndreg.transformation.base.Transformation class method) (ewoksndreg.transformation.homography.Homography class method) (ewoksndreg.transformation.numpy_backend.NumpyHomography class method) (ewoksndreg.transformation.scikitimage_backend.SciKitImageHomography class method) (ewoksndreg.transformation.scipy_backend.ScipyHomography class method) (ewoksndreg.transformation.simpleitk_backend.SimpleITKTransformation class method) get_subclass_id() (ewoksndreg.features.detection.base.FeatureDetector class method) (ewoksndreg.features.detection.scikitimage_backend.SciKitImageCensureFeatureDetector class method) (ewoksndreg.features.detection.scikitimage_backend.SciKitImageHarrisFeatureDetector class method) (ewoksndreg.features.detection.scikitimage_backend.SciKitImageOrbFeatureDetector class method) (ewoksndreg.features.detection.scikitimage_backend.SciKitImageSiftFeatureDetector class method) (ewoksndreg.features.features.base.Features class method) (ewoksndreg.features.features.numpy_backend.NumpyKeypointFeatures class method) (ewoksndreg.features.features.scikitimage_backend.SciKitImageDescriptorFeatures class method) (ewoksndreg.features.features.silx_backend.SilxDescriptorFeatures class method) (ewoksndreg.features.mapping.base.FeatureMapping class method) (ewoksndreg.features.mapping.numpy_backend.NumpyLstSqFeatureMapping class method) (ewoksndreg.features.mapping.scikitimage_backend.SciKitImageRansacFeatureMapping class method) (ewoksndreg.features.mapping.scipy_backend.ScipyLstSqFeatureMapping class method) (ewoksndreg.features.matching.base.FeatureMatching class method) (ewoksndreg.features.matching.numpy_backend.NumpyKeypointFeatureMatching class method) (ewoksndreg.features.matching.scikitimage_backend.SciKitImageDescriptorFeatureMatching class method) (ewoksndreg.features.matching.silx_backend.SilxDescriptorFeatureMatching class method) (ewoksndreg.intensities.base.IntensityMapping class method) (ewoksndreg.intensities.kornia_backend.KorniaOptimizationIntensityMapping class method) (ewoksndreg.intensities.numpy_backend.NumpyCrossCorrelationIntensityMapping class method) (ewoksndreg.intensities.scikitimage_backend.SkimageCorrelationIntensityMapping class method) (ewoksndreg.intensities.simpleitk_backend.sitkOptimizerIntesityMapping class method) (ewoksndreg.registry.Registered class method) (ewoksndreg.transformation.base.Transformation class method) (ewoksndreg.transformation.homography.Homography class method) (ewoksndreg.transformation.numpy_backend.NumpyHomography class method) (ewoksndreg.transformation.scikitimage_backend.SciKitImageHomography class method) (ewoksndreg.transformation.scipy_backend.ScipyHomography class method) (ewoksndreg.transformation.simpleitk_backend.SimpleITKTransformation class method)

get_subclass_ids() (ewoksndreg.features.detection.base.FeatureDetector class method) (ewoksndreg.features.detection.scikitimage_backend.SciKitImageCensureFeatureDetector class method) (ewoksndreg.features.detection.scikitimage_backend.SciKitImageHarrisFeatureDetector class method) (ewoksndreg.features.detection.scikitimage_backend.SciKitImageOrbFeatureDetector class method) (ewoksndreg.features.detection.scikitimage_backend.SciKitImageSiftFeatureDetector class method) (ewoksndreg.features.features.base.Features class method) (ewoksndreg.features.features.numpy_backend.NumpyKeypointFeatures class method) (ewoksndreg.features.features.scikitimage_backend.SciKitImageDescriptorFeatures class method) (ewoksndreg.features.features.silx_backend.SilxDescriptorFeatures class method) (ewoksndreg.features.mapping.base.FeatureMapping class method) (ewoksndreg.features.mapping.numpy_backend.NumpyLstSqFeatureMapping class method) (ewoksndreg.features.mapping.scikitimage_backend.SciKitImageRansacFeatureMapping class method) (ewoksndreg.features.mapping.scipy_backend.ScipyLstSqFeatureMapping class method) (ewoksndreg.features.matching.base.FeatureMatching class method) (ewoksndreg.features.matching.numpy_backend.NumpyKeypointFeatureMatching class method) (ewoksndreg.features.matching.scikitimage_backend.SciKitImageDescriptorFeatureMatching class method) (ewoksndreg.features.matching.silx_backend.SilxDescriptorFeatureMatching class method) (ewoksndreg.intensities.base.IntensityMapping class method) (ewoksndreg.intensities.kornia_backend.KorniaOptimizationIntensityMapping class method) (ewoksndreg.intensities.numpy_backend.NumpyCrossCorrelationIntensityMapping class method) (ewoksndreg.intensities.scikitimage_backend.SkimageCorrelationIntensityMapping class method) (ewoksndreg.intensities.simpleitk_backend.sitkOptimizerIntesityMapping class method) (ewoksndreg.registry.Registered class method) (ewoksndreg.transformation.base.Transformation class method) (ewoksndreg.transformation.homography.Homography class method) (ewoksndreg.transformation.numpy_backend.NumpyHomography class method) (ewoksndreg.transformation.scikitimage_backend.SciKitImageHomography class method) (ewoksndreg.transformation.scipy_backend.ScipyHomography class method) (ewoksndreg.transformation.simpleitk_backend.SimpleITKTransformation class method) get_subclass_items() (ewoksndreg.features.detection.base.FeatureDetector class method) (ewoksndreg.features.detection.scikitimage_backend.SciKitImageCensureFeatureDetector class method) (ewoksndreg.features.detection.scikitimage_backend.SciKitImageHarrisFeatureDetector class method) (ewoksndreg.features.detection.scikitimage_backend.SciKitImageOrbFeatureDetector class method) (ewoksndreg.features.detection.scikitimage_backend.SciKitImageSiftFeatureDetector class method) (ewoksndreg.features.features.base.Features class method) (ewoksndreg.features.features.numpy_backend.NumpyKeypointFeatures class method) (ewoksndreg.features.features.scikitimage_backend.SciKitImageDescriptorFeatures class method) (ewoksndreg.features.features.silx_backend.SilxDescriptorFeatures class method) (ewoksndreg.features.mapping.base.FeatureMapping class method) (ewoksndreg.features.mapping.numpy_backend.NumpyLstSqFeatureMapping class method) (ewoksndreg.features.mapping.scikitimage_backend.SciKitImageRansacFeatureMapping class method) (ewoksndreg.features.mapping.scipy_backend.ScipyLstSqFeatureMapping class method) (ewoksndreg.features.matching.base.FeatureMatching class method) (ewoksndreg.features.matching.numpy_backend.NumpyKeypointFeatureMatching class method) (ewoksndreg.features.matching.scikitimage_backend.SciKitImageDescriptorFeatureMatching class method) (ewoksndreg.features.matching.silx_backend.SilxDescriptorFeatureMatching class method) (ewoksndreg.intensities.base.IntensityMapping class method) (ewoksndreg.intensities.kornia_backend.KorniaOptimizationIntensityMapping class method) (ewoksndreg.intensities.numpy_backend.NumpyCrossCorrelationIntensityMapping class method) (ewoksndreg.intensities.scikitimage_backend.SkimageCorrelationIntensityMapping class method) (ewoksndreg.intensities.simpleitk_backend.sitkOptimizerIntesityMapping class method) (ewoksndreg.registry.Registered class method) (ewoksndreg.transformation.base.Transformation class method) (ewoksndreg.transformation.homography.Homography class method) (ewoksndreg.transformation.numpy_backend.NumpyHomography class method) (ewoksndreg.transformation.scikitimage_backend.SciKitImageHomography class method) (ewoksndreg.transformation.scipy_backend.ScipyHomography class method) (ewoksndreg.transformation.simpleitk_backend.SimpleITKTransformation class method) get_subclass_names() (ewoksndreg.tasks.example2d_stack.Example2DStack class method) (ewoksndreg.tasks.fluo_stack.FluoAllStacks class method) (ewoksndreg.tasks.fluo_stack.FluoStack class method) (ewoksndreg.tasks.id16b_file_read.ID16BFileRead class method) (ewoksndreg.tasks.reg2d_features.Reg2DFeatures class method) (ewoksndreg.tasks.reg2d_intensities.Reg2DIntensities class method) (ewoksndreg.tasks.reg2d_multistack.Reg2DPostEvaluation class method) (ewoksndreg.tasks.reg2d_multistack.Reg2DPreEvaluation class method) (ewoksndreg.tasks.reg2d_transform.Reg2DTransform class method) (ewoksndreg.tasks.select_slice.SelectSlice class method) get_subclasses() (ewoksndreg.features.detection.base.FeatureDetector class method) (ewoksndreg.features.detection.scikitimage_backend.SciKitImageCensureFeatureDetector class method) (ewoksndreg.features.detection.scikitimage_backend.SciKitImageHarrisFeatureDetector class method) (ewoksndreg.features.detection.scikitimage_backend.SciKitImageOrbFeatureDetector class method) (ewoksndreg.features.detection.scikitimage_backend.SciKitImageSiftFeatureDetector class method) (ewoksndreg.features.features.base.Features class method) (ewoksndreg.features.features.numpy_backend.NumpyKeypointFeatures class method) (ewoksndreg.features.features.scikitimage_backend.SciKitImageDescriptorFeatures class method) (ewoksndreg.features.features.silx_backend.SilxDescriptorFeatures class method) (ewoksndreg.features.mapping.base.FeatureMapping class method) (ewoksndreg.features.mapping.numpy_backend.NumpyLstSqFeatureMapping class method) (ewoksndreg.features.mapping.scikitimage_backend.SciKitImageRansacFeatureMapping class method) (ewoksndreg.features.mapping.scipy_backend.ScipyLstSqFeatureMapping class method) (ewoksndreg.features.matching.base.FeatureMatching class method) (ewoksndreg.features.matching.numpy_backend.NumpyKeypointFeatureMatching class method) (ewoksndreg.features.matching.scikitimage_backend.SciKitImageDescriptorFeatureMatching class method) (ewoksndreg.features.matching.silx_backend.SilxDescriptorFeatureMatching class method) (ewoksndreg.intensities.base.IntensityMapping class method) (ewoksndreg.intensities.kornia_backend.KorniaOptimizationIntensityMapping class method) (ewoksndreg.intensities.numpy_backend.NumpyCrossCorrelationIntensityMapping class method) (ewoksndreg.intensities.scikitimage_backend.SkimageCorrelationIntensityMapping class method) (ewoksndreg.intensities.simpleitk_backend.sitkOptimizerIntesityMapping class method) (ewoksndreg.registry.Registered class method) (ewoksndreg.tasks.example2d_stack.Example2DStack class method) (ewoksndreg.tasks.fluo_stack.FluoAllStacks class method) (ewoksndreg.tasks.fluo_stack.FluoStack class method) (ewoksndreg.tasks.id16b_file_read.ID16BFileRead class method) (ewoksndreg.tasks.reg2d_features.Reg2DFeatures class method) (ewoksndreg.tasks.reg2d_intensities.Reg2DIntensities class method) (ewoksndreg.tasks.reg2d_multistack.Reg2DPostEvaluation class method) (ewoksndreg.tasks.reg2d_multistack.Reg2DPreEvaluation class method) (ewoksndreg.tasks.reg2d_transform.Reg2DTransform class method) (ewoksndreg.tasks.select_slice.SelectSlice class method) (ewoksndreg.transformation.base.Transformation class method) (ewoksndreg.transformation.homography.Homography class method) (ewoksndreg.transformation.numpy_backend.NumpyHomography class method) (ewoksndreg.transformation.scikitimage_backend.SciKitImageHomography class method) (ewoksndreg.transformation.scipy_backend.ScipyHomography class method) (ewoksndreg.transformation.simpleitk_backend.SimpleITKTransformation class method) get_uhash_init() (ewoksndreg.tasks.example2d_stack.Example2DStack method) (ewoksndreg.tasks.fluo_stack.FluoAllStacks method) (ewoksndreg.tasks.fluo_stack.FluoStack method) (ewoksndreg.tasks.id16b_file_read.ID16BFileRead method) (ewoksndreg.tasks.reg2d_features.Reg2DFeatures method) (ewoksndreg.tasks.reg2d_intensities.Reg2DIntensities method) (ewoksndreg.tasks.reg2d_multistack.Reg2DPostEvaluation method) (ewoksndreg.tasks.reg2d_multistack.Reg2DPreEvaluation method) (ewoksndreg.tasks.reg2d_transform.Reg2DTransform method) (ewoksndreg.tasks.select_slice.SelectSlice method) getfiles() (in module ewoksndreg.tests.data.read) GradientDescent (ewoksndreg.intensities.types.SitkOptimizerType attribute) GradientDescentLineSearch (ewoksndreg.intensities.types.SitkOptimizerType attribute) guess_gaussian() (in module ewoksndreg.math.fit1d) (in module ewoksndreg.math.fit2d)

H

hamming (ewoksndreg.math.filter.WindowType attribute) hann (ewoksndreg.math.filter.WindowType attribute) Homography (class in ewoksndreg.transformation.homography)

Homography.RegistryId (class in ewoksndreg.transformation.homography) homography_transform_bounding_box() (in module ewoksndreg.transformation.numpy_backend) homography_transform_coordinates() (in module ewoksndreg.transformation.numpy_backend) homography_transform_data() (in module ewoksndreg.transformation.numpy_backend)

I

ID16BFileRead (class in ewoksndreg.tasks.id16b_file_read) identity (ewoksndreg.transformation.types.TransformationType attribute) identity() (ewoksndreg.features.mapping.base.FeatureMapping method) (ewoksndreg.features.mapping.numpy_backend.NumpyLstSqFeatureMapping method) (ewoksndreg.features.mapping.scikitimage_backend.SciKitImageRansacFeatureMapping method) (ewoksndreg.features.mapping.scipy_backend.ScipyLstSqFeatureMapping method) (ewoksndreg.intensities.base.IntensityMapping method) (ewoksndreg.intensities.kornia_backend.KorniaOptimizationIntensityMapping method) (ewoksndreg.intensities.numpy_backend.NumpyCrossCorrelationIntensityMapping method) (ewoksndreg.intensities.scikitimage_backend.SkimageCorrelationIntensityMapping method) (ewoksndreg.intensities.simpleitk_backend.sitkOptimizerIntesityMapping method) idl (ewoksndreg.math.fft.fftConvention attribute) ifft() (in module ewoksndreg.math.fft) ifft1() (in module ewoksndreg.math.fft) ifft2() (in module ewoksndreg.math.fft) ifft_interpolate() (in module ewoksndreg.math.fft) ifftshift() (in module ewoksndreg.math.fft) images() (in module ewoksndreg.tests.data.data_for_registration) index() (ewoksndreg.features.detection.base.FeatureDetector.RegistryId method) (ewoksndreg.features.detection.scikitimage_backend.SciKitImageCensureFeatureDetector.RegistryId method) (ewoksndreg.features.detection.scikitimage_backend.SciKitImageHarrisFeatureDetector.RegistryId method) (ewoksndreg.features.detection.scikitimage_backend.SciKitImageOrbFeatureDetector.RegistryId method) (ewoksndreg.features.detection.scikitimage_backend.SciKitImageSiftFeatureDetector.RegistryId method) (ewoksndreg.features.features.base.Features method) (ewoksndreg.features.features.base.Features.RegistryId method) (ewoksndreg.features.features.numpy_backend.NumpyKeypointFeatures method) (ewoksndreg.features.features.numpy_backend.NumpyKeypointFeatures.RegistryId method) (ewoksndreg.features.features.scikitimage_backend.SciKitImageDescriptorFeatures method) (ewoksndreg.features.features.scikitimage_backend.SciKitImageDescriptorFeatures.RegistryId method) (ewoksndreg.features.features.silx_backend.SilxDescriptorFeatures method) (ewoksndreg.features.features.silx_backend.SilxDescriptorFeatures.RegistryId method) (ewoksndreg.features.mapping.base.FeatureMapping.RegistryId method) (ewoksndreg.features.mapping.numpy_backend.NumpyLstSqFeatureMapping.RegistryId method) (ewoksndreg.features.mapping.scikitimage_backend.SciKitImageRansacFeatureMapping.RegistryId method) (ewoksndreg.features.mapping.scipy_backend.ScipyLstSqFeatureMapping.RegistryId method) (ewoksndreg.features.matching.base.FeatureMatching.RegistryId method) (ewoksndreg.features.matching.numpy_backend.NumpyKeypointFeatureMatching.RegistryId method) (ewoksndreg.features.matching.scikitimage_backend.SciKitImageDescriptorFeatureMatching.RegistryId method) (ewoksndreg.features.matching.silx_backend.SilxDescriptorFeatureMatching.RegistryId method) (ewoksndreg.intensities.base.IntensityMapping.RegistryId method) (ewoksndreg.intensities.kornia_backend.KorniaOptimizationIntensityMapping.RegistryId method) (ewoksndreg.intensities.numpy_backend.NumpyCrossCorrelationIntensityMapping.RegistryId method) (ewoksndreg.intensities.scikitimage_backend.SkimageCorrelationIntensityMapping.RegistryId method) (ewoksndreg.intensities.simpleitk_backend.sitkOptimizerIntesityMapping.RegistryId method) (ewoksndreg.io.input_stack.InputStack method) (ewoksndreg.io.input_stack.InputStackHdf5 method) (ewoksndreg.io.input_stack.InputStackNumpy method) (ewoksndreg.registry.Registered.RegistryId method) (ewoksndreg.registry.RegistryId method) (ewoksndreg.transformation.base.Transformation.RegistryId method) (ewoksndreg.transformation.homography.Homography.RegistryId method) (ewoksndreg.transformation.numpy_backend.NumpyHomography.RegistryId method) (ewoksndreg.transformation.scikitimage_backend.SciKitImageHomography.RegistryId method) (ewoksndreg.transformation.scipy_backend.ScipyHomography.RegistryId method) (ewoksndreg.transformation.simpleitk_backend.SimpleITKTransformation.RegistryId method) indexing_order() (in module ewoksndreg.tests.data.data_for_registration) input_context() (in module ewoksndreg.io.input_stack) input_names() (ewoksndreg.tasks.example2d_stack.Example2DStack class method) (ewoksndreg.tasks.fluo_stack.FluoAllStacks class method) (ewoksndreg.tasks.fluo_stack.FluoStack class method) (ewoksndreg.tasks.id16b_file_read.ID16BFileRead class method) (ewoksndreg.tasks.reg2d_features.Reg2DFeatures class method) (ewoksndreg.tasks.reg2d_intensities.Reg2DIntensities class method) (ewoksndreg.tasks.reg2d_multistack.Reg2DPostEvaluation class method) (ewoksndreg.tasks.reg2d_multistack.Reg2DPreEvaluation class method) (ewoksndreg.tasks.reg2d_transform.Reg2DTransform class method) (ewoksndreg.tasks.select_slice.SelectSlice class method) input_uhashes (ewoksndreg.tasks.example2d_stack.Example2DStack property) (ewoksndreg.tasks.fluo_stack.FluoAllStacks property) (ewoksndreg.tasks.fluo_stack.FluoStack property) (ewoksndreg.tasks.id16b_file_read.ID16BFileRead property) (ewoksndreg.tasks.reg2d_features.Reg2DFeatures property) (ewoksndreg.tasks.reg2d_intensities.Reg2DIntensities property) (ewoksndreg.tasks.reg2d_multistack.Reg2DPostEvaluation property) (ewoksndreg.tasks.reg2d_multistack.Reg2DPreEvaluation property) (ewoksndreg.tasks.reg2d_transform.Reg2DTransform property) (ewoksndreg.tasks.select_slice.SelectSlice property)

input_values (ewoksndreg.tasks.example2d_stack.Example2DStack property) (ewoksndreg.tasks.fluo_stack.FluoAllStacks property) (ewoksndreg.tasks.fluo_stack.FluoStack property) (ewoksndreg.tasks.id16b_file_read.ID16BFileRead property) (ewoksndreg.tasks.reg2d_features.Reg2DFeatures property) (ewoksndreg.tasks.reg2d_intensities.Reg2DIntensities property) (ewoksndreg.tasks.reg2d_multistack.Reg2DPostEvaluation property) (ewoksndreg.tasks.reg2d_multistack.Reg2DPreEvaluation property) (ewoksndreg.tasks.reg2d_transform.Reg2DTransform property) (ewoksndreg.tasks.select_slice.SelectSlice property) input_variables (ewoksndreg.tasks.example2d_stack.Example2DStack property) (ewoksndreg.tasks.fluo_stack.FluoAllStacks property) (ewoksndreg.tasks.fluo_stack.FluoStack property) (ewoksndreg.tasks.id16b_file_read.ID16BFileRead property) (ewoksndreg.tasks.reg2d_features.Reg2DFeatures property) (ewoksndreg.tasks.reg2d_intensities.Reg2DIntensities property) (ewoksndreg.tasks.reg2d_multistack.Reg2DPostEvaluation property) (ewoksndreg.tasks.reg2d_multistack.Reg2DPreEvaluation property) (ewoksndreg.tasks.reg2d_transform.Reg2DTransform property) (ewoksndreg.tasks.select_slice.SelectSlice property) inputs (ewoksndreg.tasks.example2d_stack.Example2DStack property) (ewoksndreg.tasks.fluo_stack.FluoAllStacks property) (ewoksndreg.tasks.fluo_stack.FluoStack property) (ewoksndreg.tasks.id16b_file_read.ID16BFileRead property) (ewoksndreg.tasks.reg2d_features.Reg2DFeatures property) (ewoksndreg.tasks.reg2d_intensities.Reg2DIntensities property) (ewoksndreg.tasks.reg2d_multistack.Reg2DPostEvaluation property) (ewoksndreg.tasks.reg2d_multistack.Reg2DPreEvaluation property) (ewoksndreg.tasks.reg2d_transform.Reg2DTransform property) (ewoksndreg.tasks.select_slice.SelectSlice property) InputStack (class in ewoksndreg.io.input_stack) InputStackHdf5 (class in ewoksndreg.io.input_stack) InputStackNumpy (class in ewoksndreg.io.input_stack) instance_nonce() (ewoksndreg.tasks.example2d_stack.Example2DStack method) (ewoksndreg.tasks.fluo_stack.FluoAllStacks method) (ewoksndreg.tasks.fluo_stack.FluoStack method) (ewoksndreg.tasks.id16b_file_read.ID16BFileRead method) (ewoksndreg.tasks.reg2d_features.Reg2DFeatures method) (ewoksndreg.tasks.reg2d_intensities.Reg2DIntensities method) (ewoksndreg.tasks.reg2d_multistack.Reg2DPostEvaluation method) (ewoksndreg.tasks.reg2d_multistack.Reg2DPreEvaluation method) (ewoksndreg.tasks.reg2d_transform.Reg2DTransform method) (ewoksndreg.tasks.select_slice.SelectSlice method) instantiate() (ewoksndreg.tasks.example2d_stack.Example2DStack class method) (ewoksndreg.tasks.fluo_stack.FluoAllStacks class method) (ewoksndreg.tasks.fluo_stack.FluoStack class method) (ewoksndreg.tasks.id16b_file_read.ID16BFileRead class method) (ewoksndreg.tasks.reg2d_features.Reg2DFeatures class method) (ewoksndreg.tasks.reg2d_intensities.Reg2DIntensities class method) (ewoksndreg.tasks.reg2d_multistack.Reg2DPostEvaluation class method) (ewoksndreg.tasks.reg2d_multistack.Reg2DPreEvaluation class method) (ewoksndreg.tasks.reg2d_transform.Reg2DTransform class method) (ewoksndreg.tasks.select_slice.SelectSlice class method) IntensityMapping (class in ewoksndreg.intensities.base) IntensityMapping.RegistryId (class in ewoksndreg.intensities.base) inverse (ewoksndreg.transformation.scikitimage_backend.ShiftTransform property) is_homography() (ewoksndreg.transformation.base.Transformation method) (ewoksndreg.transformation.homography.Homography method) (ewoksndreg.transformation.numpy_backend.NumpyHomography method) (ewoksndreg.transformation.scikitimage_backend.SciKitImageHomography method) (ewoksndreg.transformation.scipy_backend.ScipyHomography method) (ewoksndreg.transformation.simpleitk_backend.SimpleITKTransformation method) is_ready_to_execute (ewoksndreg.tasks.example2d_stack.Example2DStack property) (ewoksndreg.tasks.fluo_stack.FluoAllStacks property) (ewoksndreg.tasks.fluo_stack.FluoStack property) (ewoksndreg.tasks.id16b_file_read.ID16BFileRead property) (ewoksndreg.tasks.reg2d_features.Reg2DFeatures property) (ewoksndreg.tasks.reg2d_intensities.Reg2DIntensities property) (ewoksndreg.tasks.reg2d_multistack.Reg2DPostEvaluation property) (ewoksndreg.tasks.reg2d_multistack.Reg2DPreEvaluation property) (ewoksndreg.tasks.reg2d_transform.Reg2DTransform property) (ewoksndreg.tasks.select_slice.SelectSlice property)

J

job_id (ewoksndreg.tasks.example2d_stack.Example2DStack property) (ewoksndreg.tasks.fluo_stack.FluoAllStacks property) (ewoksndreg.tasks.fluo_stack.FluoStack property) (ewoksndreg.tasks.id16b_file_read.ID16BFileRead property) (ewoksndreg.tasks.reg2d_features.Reg2DFeatures property) (ewoksndreg.tasks.reg2d_intensities.Reg2DIntensities property) (ewoksndreg.tasks.reg2d_multistack.Reg2DPostEvaluation property) (ewoksndreg.tasks.reg2d_multistack.Reg2DPreEvaluation property) (ewoksndreg.tasks.reg2d_transform.Reg2DTransform property) (ewoksndreg.tasks.select_slice.SelectSlice property)

JointHistogramMutualInformation (ewoksndreg.intensities.types.SitkMetricType attribute)

K

keypoints (ewoksndreg.features.features.numpy_backend.NumpyKeypointFeatures property) KorniaMetricType (class in ewoksndreg.intensities.types)

KorniaOptimizationIntensityMapping (class in ewoksndreg.intensities.kornia_backend) KorniaOptimizationIntensityMapping.RegistryId (class in ewoksndreg.intensities.kornia_backend) KorniaOptimizerType (class in ewoksndreg.intensities.types)

L

label (ewoksndreg.tasks.example2d_stack.Example2DStack property) (ewoksndreg.tasks.fluo_stack.FluoAllStacks property) (ewoksndreg.tasks.fluo_stack.FluoStack property) (ewoksndreg.tasks.id16b_file_read.ID16BFileRead property) (ewoksndreg.tasks.reg2d_features.Reg2DFeatures property) (ewoksndreg.tasks.reg2d_intensities.Reg2DIntensities property) (ewoksndreg.tasks.reg2d_multistack.Reg2DPostEvaluation property) (ewoksndreg.tasks.reg2d_multistack.Reg2DPreEvaluation property) (ewoksndreg.tasks.reg2d_transform.Reg2DTransform property) (ewoksndreg.tasks.select_slice.SelectSlice property) lanczos (ewoksndreg.math.filter.WindowType attribute) LBFGSB (ewoksndreg.intensities.types.SitkOptimizerType attribute)

leastsq() (in module ewoksndreg.math.fit1d) linfit() (in module ewoksndreg.math.fit1d) linfit2() (in module ewoksndreg.math.fit1d) linfit_zerointercept() (in module ewoksndreg.math.fit1d) linfit_zerointercept2() (in module ewoksndreg.math.fit1d) lstsq() (in module ewoksndreg.math.fit1d) (in module ewoksndreg.transformation.lstsq) lstsq_bound() (in module ewoksndreg.math.fit1d) lstsq_cov() (in module ewoksndreg.math.fit1d) lstsq_nonnegative() (in module ewoksndreg.math.fit1d) lstsq_std() (in module ewoksndreg.math.fit1d) lstsq_std_indep() (in module ewoksndreg.math.fit1d)

M

match() (ewoksndreg.features.matching.base.FeatureMatching method) (ewoksndreg.features.matching.numpy_backend.NumpyKeypointFeatureMatching method) (ewoksndreg.features.matching.scikitimage_backend.SciKitImageDescriptorFeatureMatching method) (ewoksndreg.features.matching.silx_backend.SilxDescriptorFeatureMatching method) match_features() (in module ewoksndreg.features.registration) match_keypoints() (in module ewoksndreg.features.matching.numpy_backend) matrix_from_params() (in module ewoksndreg.transformation.homography) MattesMutualInformation (ewoksndreg.intensities.types.SitkMetricType attribute) MeanAbsoluteError (ewoksndreg.intensities.types.KorniaMetricType attribute) MeanSquaredError (ewoksndreg.intensities.types.KorniaMetricType attribute) meanSquaredMetric() (in module ewoksndreg.intensities.metrics) MeanSquares (ewoksndreg.intensities.types.SitkMetricType attribute) median (ewoksndreg.math.filter.FilterType attribute) meijering (ewoksndreg.math.filter.FilterType attribute) MISSING_DATA (ewoksndreg.tasks.example2d_stack.Example2DStack attribute) (ewoksndreg.tasks.fluo_stack.FluoAllStacks attribute) (ewoksndreg.tasks.fluo_stack.FluoStack attribute) (ewoksndreg.tasks.id16b_file_read.ID16BFileRead attribute) (ewoksndreg.tasks.reg2d_features.Reg2DFeatures attribute) (ewoksndreg.tasks.reg2d_intensities.Reg2DIntensities attribute) (ewoksndreg.tasks.reg2d_multistack.Reg2DPostEvaluation attribute) (ewoksndreg.tasks.reg2d_multistack.Reg2DPreEvaluation attribute) (ewoksndreg.tasks.reg2d_transform.Reg2DTransform attribute) (ewoksndreg.tasks.select_slice.SelectSlice attribute) missing_inputs (ewoksndreg.tasks.example2d_stack.Example2DStack property) (ewoksndreg.tasks.fluo_stack.FluoAllStacks property) (ewoksndreg.tasks.fluo_stack.FluoStack property) (ewoksndreg.tasks.id16b_file_read.ID16BFileRead property) (ewoksndreg.tasks.reg2d_features.Reg2DFeatures property) (ewoksndreg.tasks.reg2d_intensities.Reg2DIntensities property) (ewoksndreg.tasks.reg2d_multistack.Reg2DPostEvaluation property) (ewoksndreg.tasks.reg2d_multistack.Reg2DPreEvaluation property) (ewoksndreg.tasks.reg2d_transform.Reg2DTransform property) (ewoksndreg.tasks.select_slice.SelectSlice property) missing_outputs (ewoksndreg.tasks.example2d_stack.Example2DStack property) (ewoksndreg.tasks.fluo_stack.FluoAllStacks property) (ewoksndreg.tasks.fluo_stack.FluoStack property) (ewoksndreg.tasks.id16b_file_read.ID16BFileRead property) (ewoksndreg.tasks.reg2d_features.Reg2DFeatures property) (ewoksndreg.tasks.reg2d_intensities.Reg2DIntensities property) (ewoksndreg.tasks.reg2d_multistack.Reg2DPostEvaluation property) (ewoksndreg.tasks.reg2d_multistack.Reg2DPreEvaluation property) (ewoksndreg.tasks.reg2d_transform.Reg2DTransform property) (ewoksndreg.tasks.select_slice.SelectSlice property) module ewoksndreg ewoksndreg.evaluation ewoksndreg.evaluation.eval_metrics ewoksndreg.evaluation.evaluation ewoksndreg.features ewoksndreg.features.detection ewoksndreg.features.detection.base ewoksndreg.features.detection.scikitimage_backend ewoksndreg.features.detection.silx_backend ewoksndreg.features.features ewoksndreg.features.features.base ewoksndreg.features.features.numpy_backend ewoksndreg.features.features.scikitimage_backend ewoksndreg.features.features.silx_backend ewoksndreg.features.mapping ewoksndreg.features.mapping.base ewoksndreg.features.mapping.lstsq ewoksndreg.features.mapping.numpy_backend ewoksndreg.features.mapping.scikitimage_backend ewoksndreg.features.mapping.scipy_backend ewoksndreg.features.matching ewoksndreg.features.matching.base ewoksndreg.features.matching.numpy_backend ewoksndreg.features.matching.scikitimage_backend ewoksndreg.features.matching.silx_backend ewoksndreg.features.registration ewoksndreg.intensities ewoksndreg.intensities.base ewoksndreg.intensities.kornia_backend ewoksndreg.intensities.metrics ewoksndreg.intensities.numpy_backend ewoksndreg.intensities.registration ewoksndreg.intensities.scikitimage_backend ewoksndreg.intensities.simpleitk_backend ewoksndreg.intensities.torch_metrics ewoksndreg.intensities.types ewoksndreg.io ewoksndreg.io.input_stack ewoksndreg.io.output_stack ewoksndreg.math ewoksndreg.math.center ewoksndreg.math.crop ewoksndreg.math.fft ewoksndreg.math.filter ewoksndreg.math.fit1d ewoksndreg.math.fit2d ewoksndreg.math.normalization ewoksndreg.registry ewoksndreg.tasks ewoksndreg.tasks.example2d_stack ewoksndreg.tasks.fluo_stack ewoksndreg.tasks.id16b_file_read ewoksndreg.tasks.reg2d_features ewoksndreg.tasks.reg2d_intensities ewoksndreg.tasks.reg2d_multistack ewoksndreg.tasks.reg2d_transform ewoksndreg.tasks.select_slice ewoksndreg.tests ewoksndreg.tests.conftest ewoksndreg.tests.data ewoksndreg.tests.data.data_for_registration ewoksndreg.tests.data.data_from_h5 ewoksndreg.tests.data.read ewoksndreg.tests.math ewoksndreg.tests.math.test_fft ewoksndreg.tests.math.test_fit1d ewoksndreg.tests.math.test_fit2d ewoksndreg.tests.test_crop ewoksndreg.tests.test_data ewoksndreg.tests.test_evaluation ewoksndreg.tests.test_feature_registration ewoksndreg.tests.test_intensity_registration ewoksndreg.tests.test_mapping_solvers ewoksndreg.tests.test_match_numpy ewoksndreg.tests.test_nmi_loss ewoksndreg.tests.test_stack_io ewoksndreg.tests.test_tasks ewoksndreg.tests.test_transformation_apply ewoksndreg.tests.test_transformation_numpy ewoksndreg.tests.test_transformation_parameter ewoksndreg.tests.test_transformation_types ewoksndreg.tests.tutorials ewoksndreg.tests.tutorials.test_reg2d_features ewoksndreg.tests.tutorials.test_reg2d_intensities ewoksndreg.tests.workflow_tests ewoksndreg.tests.workflow_tests.test_sitk_workflow ewoksndreg.tests.workflow_tests.test_sp_workflows ewoksndreg.tests.workflow_tests.test_strategy ewoksndreg.tests.workflow_tests.workflows ewoksndreg.transformation ewoksndreg.transformation.apply ewoksndreg.transformation.base ewoksndreg.transformation.homography ewoksndreg.transformation.lstsq ewoksndreg.transformation.numpy_backend ewoksndreg.transformation.scikitimage_backend ewoksndreg.transformation.scipy_backend ewoksndreg.transformation.simpleitk_backend ewoksndreg.transformation.transform ewoksndreg.transformation.types

mse_eval() (in module ewoksndreg.evaluation.eval_metrics) MutualInformation (ewoksndreg.intensities.types.KorniaMetricType attribute)

N

name (ewoksndreg.features.detection.base.FeatureDetector.RegistryId attribute) (ewoksndreg.features.detection.scikitimage_backend.SciKitImageCensureFeatureDetector.RegistryId attribute) (ewoksndreg.features.detection.scikitimage_backend.SciKitImageHarrisFeatureDetector.RegistryId attribute) (ewoksndreg.features.detection.scikitimage_backend.SciKitImageOrbFeatureDetector.RegistryId attribute) (ewoksndreg.features.detection.scikitimage_backend.SciKitImageSiftFeatureDetector.RegistryId attribute) (ewoksndreg.features.features.base.Features.RegistryId attribute) (ewoksndreg.features.features.numpy_backend.NumpyKeypointFeatures.RegistryId attribute) (ewoksndreg.features.features.scikitimage_backend.SciKitImageDescriptorFeatures.RegistryId attribute) (ewoksndreg.features.features.silx_backend.SilxDescriptorFeatures.RegistryId attribute) (ewoksndreg.features.mapping.base.FeatureMapping.RegistryId attribute) (ewoksndreg.features.mapping.numpy_backend.NumpyLstSqFeatureMapping.RegistryId attribute) (ewoksndreg.features.mapping.scikitimage_backend.SciKitImageRansacFeatureMapping.RegistryId attribute) (ewoksndreg.features.mapping.scipy_backend.ScipyLstSqFeatureMapping.RegistryId attribute) (ewoksndreg.features.matching.base.FeatureMatching.RegistryId attribute) (ewoksndreg.features.matching.numpy_backend.NumpyKeypointFeatureMatching.RegistryId attribute) (ewoksndreg.features.matching.scikitimage_backend.SciKitImageDescriptorFeatureMatching.RegistryId attribute) (ewoksndreg.features.matching.silx_backend.SilxDescriptorFeatureMatching.RegistryId attribute) (ewoksndreg.intensities.base.IntensityMapping.RegistryId attribute) (ewoksndreg.intensities.kornia_backend.KorniaOptimizationIntensityMapping.RegistryId attribute) (ewoksndreg.intensities.numpy_backend.NumpyCrossCorrelationIntensityMapping.RegistryId attribute) (ewoksndreg.intensities.scikitimage_backend.SkimageCorrelationIntensityMapping.RegistryId attribute) (ewoksndreg.intensities.simpleitk_backend.sitkOptimizerIntesityMapping.RegistryId attribute) (ewoksndreg.registry.Registered.RegistryId attribute) (ewoksndreg.registry.RegistryId attribute) (ewoksndreg.transformation.base.Transformation.RegistryId attribute) (ewoksndreg.transformation.homography.Homography.RegistryId attribute) (ewoksndreg.transformation.numpy_backend.NumpyHomography.RegistryId attribute) (ewoksndreg.transformation.scikitimage_backend.SciKitImageHomography.RegistryId attribute) (ewoksndreg.transformation.scipy_backend.ScipyHomography.RegistryId attribute) (ewoksndreg.transformation.simpleitk_backend.SimpleITKTransformation.RegistryId attribute) named_input_values (ewoksndreg.tasks.example2d_stack.Example2DStack property) (ewoksndreg.tasks.fluo_stack.FluoAllStacks property) (ewoksndreg.tasks.fluo_stack.FluoStack property) (ewoksndreg.tasks.id16b_file_read.ID16BFileRead property) (ewoksndreg.tasks.reg2d_features.Reg2DFeatures property) (ewoksndreg.tasks.reg2d_intensities.Reg2DIntensities property) (ewoksndreg.tasks.reg2d_multistack.Reg2DPostEvaluation property) (ewoksndreg.tasks.reg2d_multistack.Reg2DPreEvaluation property) (ewoksndreg.tasks.reg2d_transform.Reg2DTransform property) (ewoksndreg.tasks.select_slice.SelectSlice property) nanlinfit() (in module ewoksndreg.math.fit1d) nanlinfit2() (in module ewoksndreg.math.fit1d) ndim (ewoksndreg.features.features.base.Features property) (ewoksndreg.features.features.numpy_backend.NumpyKeypointFeatures property) (ewoksndreg.features.features.scikitimage_backend.SciKitImageDescriptorFeatures property) (ewoksndreg.features.features.silx_backend.SilxDescriptorFeatures property) (ewoksndreg.io.input_stack.InputStack property) (ewoksndreg.io.input_stack.InputStackHdf5 property) (ewoksndreg.io.input_stack.InputStackNumpy property)

nfeatures (ewoksndreg.features.features.base.Features property) (ewoksndreg.features.features.numpy_backend.NumpyKeypointFeatures property) (ewoksndreg.features.features.scikitimage_backend.SciKitImageDescriptorFeatures property) (ewoksndreg.features.features.silx_backend.SilxDescriptorFeatures property) nmi_loss() (in module ewoksndreg.intensities.torch_metrics) node_id (ewoksndreg.tasks.example2d_stack.Example2DStack property) (ewoksndreg.tasks.fluo_stack.FluoAllStacks property) (ewoksndreg.tasks.fluo_stack.FluoStack property) (ewoksndreg.tasks.id16b_file_read.ID16BFileRead property) (ewoksndreg.tasks.reg2d_features.Reg2DFeatures property) (ewoksndreg.tasks.reg2d_intensities.Reg2DIntensities property) (ewoksndreg.tasks.reg2d_multistack.Reg2DPostEvaluation property) (ewoksndreg.tasks.reg2d_multistack.Reg2DPreEvaluation property) (ewoksndreg.tasks.reg2d_transform.Reg2DTransform property) (ewoksndreg.tasks.select_slice.SelectSlice property) noisy_eval() (in module ewoksndreg.evaluation.eval_metrics) noisy_imagestacks() (in module ewoksndreg.tests.data.data_for_registration) normalizedMutualInformationMetric() (in module ewoksndreg.intensities.metrics) npositional_inputs (ewoksndreg.tasks.example2d_stack.Example2DStack property) (ewoksndreg.tasks.fluo_stack.FluoAllStacks property) (ewoksndreg.tasks.fluo_stack.FluoStack property) (ewoksndreg.tasks.id16b_file_read.ID16BFileRead property) (ewoksndreg.tasks.reg2d_features.Reg2DFeatures property) (ewoksndreg.tasks.reg2d_intensities.Reg2DIntensities property) (ewoksndreg.tasks.reg2d_multistack.Reg2DPostEvaluation property) (ewoksndreg.tasks.reg2d_multistack.Reg2DPreEvaluation property) (ewoksndreg.tasks.reg2d_transform.Reg2DTransform property) (ewoksndreg.tasks.select_slice.SelectSlice property) numpy (ewoksndreg.math.fft.fftConvention attribute) NumpyCrossCorrelationIntensityMapping (class in ewoksndreg.intensities.numpy_backend) NumpyCrossCorrelationIntensityMapping.RegistryId (class in ewoksndreg.intensities.numpy_backend) NumpyHomography (class in ewoksndreg.transformation.numpy_backend) NumpyHomography.RegistryId (class in ewoksndreg.transformation.numpy_backend) NumpyKeypointFeatureMatching (class in ewoksndreg.features.matching.numpy_backend) NumpyKeypointFeatureMatching.RegistryId (class in ewoksndreg.features.matching.numpy_backend) NumpyKeypointFeatures (class in ewoksndreg.features.features.numpy_backend) NumpyKeypointFeatures.RegistryId (class in ewoksndreg.features.features.numpy_backend) NumpyLstSqFeatureMapping (class in ewoksndreg.features.mapping.numpy_backend) NumpyLstSqFeatureMapping.RegistryId (class in ewoksndreg.features.mapping.numpy_backend) nuttall (ewoksndreg.math.filter.WindowType attribute)

O

optional_input_names() (ewoksndreg.tasks.example2d_stack.Example2DStack class method) (ewoksndreg.tasks.fluo_stack.FluoAllStacks class method) (ewoksndreg.tasks.fluo_stack.FluoStack class method) (ewoksndreg.tasks.id16b_file_read.ID16BFileRead class method) (ewoksndreg.tasks.reg2d_features.Reg2DFeatures class method) (ewoksndreg.tasks.reg2d_intensities.Reg2DIntensities class method) (ewoksndreg.tasks.reg2d_multistack.Reg2DPostEvaluation class method) (ewoksndreg.tasks.reg2d_multistack.Reg2DPreEvaluation class method) (ewoksndreg.tasks.reg2d_transform.Reg2DTransform class method) (ewoksndreg.tasks.select_slice.SelectSlice class method) output_context() (in module ewoksndreg.io.output_stack) output_metadata (ewoksndreg.tasks.example2d_stack.Example2DStack property) (ewoksndreg.tasks.fluo_stack.FluoAllStacks property) (ewoksndreg.tasks.fluo_stack.FluoStack property) (ewoksndreg.tasks.id16b_file_read.ID16BFileRead property) (ewoksndreg.tasks.reg2d_features.Reg2DFeatures property) (ewoksndreg.tasks.reg2d_intensities.Reg2DIntensities property) (ewoksndreg.tasks.reg2d_multistack.Reg2DPostEvaluation property) (ewoksndreg.tasks.reg2d_multistack.Reg2DPreEvaluation property) (ewoksndreg.tasks.reg2d_transform.Reg2DTransform property) (ewoksndreg.tasks.select_slice.SelectSlice property) output_names() (ewoksndreg.tasks.example2d_stack.Example2DStack class method) (ewoksndreg.tasks.fluo_stack.FluoAllStacks class method) (ewoksndreg.tasks.fluo_stack.FluoStack class method) (ewoksndreg.tasks.id16b_file_read.ID16BFileRead class method) (ewoksndreg.tasks.reg2d_features.Reg2DFeatures class method) (ewoksndreg.tasks.reg2d_intensities.Reg2DIntensities class method) (ewoksndreg.tasks.reg2d_multistack.Reg2DPostEvaluation class method) (ewoksndreg.tasks.reg2d_multistack.Reg2DPreEvaluation class method) (ewoksndreg.tasks.reg2d_transform.Reg2DTransform class method) (ewoksndreg.tasks.select_slice.SelectSlice class method) output_transfer_data (ewoksndreg.tasks.example2d_stack.Example2DStack property) (ewoksndreg.tasks.fluo_stack.FluoAllStacks property) (ewoksndreg.tasks.fluo_stack.FluoStack property) (ewoksndreg.tasks.id16b_file_read.ID16BFileRead property) (ewoksndreg.tasks.reg2d_features.Reg2DFeatures property) (ewoksndreg.tasks.reg2d_intensities.Reg2DIntensities property) (ewoksndreg.tasks.reg2d_multistack.Reg2DPostEvaluation property) (ewoksndreg.tasks.reg2d_multistack.Reg2DPreEvaluation property) (ewoksndreg.tasks.reg2d_transform.Reg2DTransform property) (ewoksndreg.tasks.select_slice.SelectSlice property) output_uhashes (ewoksndreg.tasks.example2d_stack.Example2DStack property) (ewoksndreg.tasks.fluo_stack.FluoAllStacks property) (ewoksndreg.tasks.fluo_stack.FluoStack property) (ewoksndreg.tasks.id16b_file_read.ID16BFileRead property) (ewoksndreg.tasks.reg2d_features.Reg2DFeatures property) (ewoksndreg.tasks.reg2d_intensities.Reg2DIntensities property) (ewoksndreg.tasks.reg2d_multistack.Reg2DPostEvaluation property) (ewoksndreg.tasks.reg2d_multistack.Reg2DPreEvaluation property) (ewoksndreg.tasks.reg2d_transform.Reg2DTransform property) (ewoksndreg.tasks.select_slice.SelectSlice property)

output_values (ewoksndreg.tasks.example2d_stack.Example2DStack property) (ewoksndreg.tasks.fluo_stack.FluoAllStacks property) (ewoksndreg.tasks.fluo_stack.FluoStack property) (ewoksndreg.tasks.id16b_file_read.ID16BFileRead property) (ewoksndreg.tasks.reg2d_features.Reg2DFeatures property) (ewoksndreg.tasks.reg2d_intensities.Reg2DIntensities property) (ewoksndreg.tasks.reg2d_multistack.Reg2DPostEvaluation property) (ewoksndreg.tasks.reg2d_multistack.Reg2DPreEvaluation property) (ewoksndreg.tasks.reg2d_transform.Reg2DTransform property) (ewoksndreg.tasks.select_slice.SelectSlice property) output_variables (ewoksndreg.tasks.example2d_stack.Example2DStack property) (ewoksndreg.tasks.fluo_stack.FluoAllStacks property) (ewoksndreg.tasks.fluo_stack.FluoStack property) (ewoksndreg.tasks.id16b_file_read.ID16BFileRead property) (ewoksndreg.tasks.reg2d_features.Reg2DFeatures property) (ewoksndreg.tasks.reg2d_intensities.Reg2DIntensities property) (ewoksndreg.tasks.reg2d_multistack.Reg2DPostEvaluation property) (ewoksndreg.tasks.reg2d_multistack.Reg2DPreEvaluation property) (ewoksndreg.tasks.reg2d_transform.Reg2DTransform property) (ewoksndreg.tasks.select_slice.SelectSlice property) outputs (ewoksndreg.tasks.example2d_stack.Example2DStack property) (ewoksndreg.tasks.fluo_stack.FluoAllStacks property) (ewoksndreg.tasks.fluo_stack.FluoStack property) (ewoksndreg.tasks.id16b_file_read.ID16BFileRead property) (ewoksndreg.tasks.reg2d_features.Reg2DFeatures property) (ewoksndreg.tasks.reg2d_intensities.Reg2DIntensities property) (ewoksndreg.tasks.reg2d_multistack.Reg2DPostEvaluation property) (ewoksndreg.tasks.reg2d_multistack.Reg2DPreEvaluation property) (ewoksndreg.tasks.reg2d_transform.Reg2DTransform property) (ewoksndreg.tasks.select_slice.SelectSlice property) OutputStack (class in ewoksndreg.io.output_stack) OutputStackHdf5 (class in ewoksndreg.io.output_stack) OutputStackNumpy (class in ewoksndreg.io.output_stack)

P

params_from_trans() (in module ewoksndreg.transformation.homography) parse() (in module ewoksndreg.tasks.select_slice) parzen (ewoksndreg.math.filter.WindowType attribute) passive (ewoksndreg.transformation.homography.Homography property) (ewoksndreg.transformation.numpy_backend.NumpyHomography property) (ewoksndreg.transformation.scikitimage_backend.SciKitImageHomography property) (ewoksndreg.transformation.scipy_backend.ScipyHomography property) (ewoksndreg.transformation.simpleitk_backend.SimpleITKTransformation property) peak_eval() (in module ewoksndreg.evaluation.eval_metrics) phase_cross_correlation() (in module ewoksndreg.intensities.scikitimage_backend) positional_input_values (ewoksndreg.tasks.example2d_stack.Example2DStack property) (ewoksndreg.tasks.fluo_stack.FluoAllStacks property) (ewoksndreg.tasks.fluo_stack.FluoStack property) (ewoksndreg.tasks.id16b_file_read.ID16BFileRead property) (ewoksndreg.tasks.reg2d_features.Reg2DFeatures property) (ewoksndreg.tasks.reg2d_intensities.Reg2DIntensities property) (ewoksndreg.tasks.reg2d_multistack.Reg2DPostEvaluation property) (ewoksndreg.tasks.reg2d_multistack.Reg2DPreEvaluation property) (ewoksndreg.tasks.reg2d_transform.Reg2DTransform property) (ewoksndreg.tasks.select_slice.SelectSlice property)

post_evaluation() (in module ewoksndreg.evaluation.evaluation) Powell (ewoksndreg.intensities.types.SitkOptimizerType attribute) pre_evaluation() (in module ewoksndreg.evaluation.evaluation) preprocess() (in module ewoksndreg.math.filter) projective (ewoksndreg.transformation.types.TransformationType attribute)

Q

quartic_kernel() (in module ewoksndreg.intensities.torch_metrics)

R

random_state() (in module ewoksndreg.tests.test_mapping_solvers) range_normalization() (in module ewoksndreg.math.normalization) Reg2DFeatures (class in ewoksndreg.tasks.reg2d_features) Reg2DIntensities (class in ewoksndreg.tasks.reg2d_intensities) Reg2DPostEvaluation (class in ewoksndreg.tasks.reg2d_multistack) Reg2DPreEvaluation (class in ewoksndreg.tasks.reg2d_multistack) Reg2DTransform (class in ewoksndreg.tasks.reg2d_transform) Registered (class in ewoksndreg.registry) Registered.RegistryId (class in ewoksndreg.registry) RegistryId (class in ewoksndreg.registry) required_input_names() (ewoksndreg.tasks.example2d_stack.Example2DStack class method) (ewoksndreg.tasks.fluo_stack.FluoAllStacks class method) (ewoksndreg.tasks.fluo_stack.FluoStack class method) (ewoksndreg.tasks.id16b_file_read.ID16BFileRead class method) (ewoksndreg.tasks.reg2d_features.Reg2DFeatures class method) (ewoksndreg.tasks.reg2d_intensities.Reg2DIntensities class method) (ewoksndreg.tasks.reg2d_multistack.Reg2DPostEvaluation class method) (ewoksndreg.tasks.reg2d_multistack.Reg2DPreEvaluation class method) (ewoksndreg.tasks.reg2d_transform.Reg2DTransform class method) (ewoksndreg.tasks.select_slice.SelectSlice class method) rescale() (in module ewoksndreg.transformation.transform) reset_state() (ewoksndreg.tasks.example2d_stack.Example2DStack method) (ewoksndreg.tasks.fluo_stack.FluoAllStacks method) (ewoksndreg.tasks.fluo_stack.FluoStack method) (ewoksndreg.tasks.id16b_file_read.ID16BFileRead method) (ewoksndreg.tasks.reg2d_features.Reg2DFeatures method) (ewoksndreg.tasks.reg2d_intensities.Reg2DIntensities method) (ewoksndreg.tasks.reg2d_multistack.Reg2DPostEvaluation method) (ewoksndreg.tasks.reg2d_multistack.Reg2DPreEvaluation method) (ewoksndreg.tasks.reg2d_transform.Reg2DTransform method) (ewoksndreg.tasks.select_slice.SelectSlice method)

residuals() (ewoksndreg.transformation.scikitimage_backend.ShiftTransform method) resize() (in module ewoksndreg.transformation.transform) reverse_indices() (in module ewoksndreg.transformation.homography) rigid (ewoksndreg.transformation.types.TransformationType attribute) RMSprop (ewoksndreg.intensities.types.KorniaOptimizerType attribute) run() (ewoksndreg.tasks.example2d_stack.Example2DStack method) (ewoksndreg.tasks.fluo_stack.FluoAllStacks method) (ewoksndreg.tasks.fluo_stack.FluoStack method) (ewoksndreg.tasks.id16b_file_read.ID16BFileRead method) (ewoksndreg.tasks.reg2d_features.Reg2DFeatures method) (ewoksndreg.tasks.reg2d_intensities.Reg2DIntensities method) (ewoksndreg.tasks.reg2d_multistack.Reg2DPostEvaluation method) (ewoksndreg.tasks.reg2d_multistack.Reg2DPreEvaluation method) (ewoksndreg.tasks.reg2d_transform.Reg2DTransform method) (ewoksndreg.tasks.select_slice.SelectSlice method)

S

sato (ewoksndreg.math.filter.FilterType attribute) SciKitImageCensureFeatureDetector (class in ewoksndreg.features.detection.scikitimage_backend) SciKitImageCensureFeatureDetector.RegistryId (class in ewoksndreg.features.detection.scikitimage_backend) SciKitImageDescriptorFeatureMatching (class in ewoksndreg.features.matching.scikitimage_backend) SciKitImageDescriptorFeatureMatching.RegistryId (class in ewoksndreg.features.matching.scikitimage_backend) SciKitImageDescriptorFeatures (class in ewoksndreg.features.features.scikitimage_backend) SciKitImageDescriptorFeatures.RegistryId (class in ewoksndreg.features.features.scikitimage_backend) SciKitImageHarrisFeatureDetector (class in ewoksndreg.features.detection.scikitimage_backend) SciKitImageHarrisFeatureDetector.RegistryId (class in ewoksndreg.features.detection.scikitimage_backend) SciKitImageHomography (class in ewoksndreg.transformation.scikitimage_backend) SciKitImageHomography.RegistryId (class in ewoksndreg.transformation.scikitimage_backend) SciKitImageOrbFeatureDetector (class in ewoksndreg.features.detection.scikitimage_backend) SciKitImageOrbFeatureDetector.RegistryId (class in ewoksndreg.features.detection.scikitimage_backend) SciKitImageRansacFeatureMapping (class in ewoksndreg.features.mapping.scikitimage_backend) SciKitImageRansacFeatureMapping.RegistryId (class in ewoksndreg.features.mapping.scikitimage_backend) SciKitImageSiftFeatureDetector (class in ewoksndreg.features.detection.scikitimage_backend) SciKitImageSiftFeatureDetector.RegistryId (class in ewoksndreg.features.detection.scikitimage_backend) ScipyHomography (class in ewoksndreg.transformation.scipy_backend) ScipyHomography.RegistryId (class in ewoksndreg.transformation.scipy_backend) ScipyLstSqFeatureMapping (class in ewoksndreg.features.mapping.scipy_backend) ScipyLstSqFeatureMapping.RegistryId (class in ewoksndreg.features.mapping.scipy_backend) SelectSlice (class in ewoksndreg.tasks.select_slice) set_uhash_init() (ewoksndreg.tasks.example2d_stack.Example2DStack method) (ewoksndreg.tasks.fluo_stack.FluoAllStacks method) (ewoksndreg.tasks.fluo_stack.FluoStack method) (ewoksndreg.tasks.id16b_file_read.ID16BFileRead method) (ewoksndreg.tasks.reg2d_features.Reg2DFeatures method) (ewoksndreg.tasks.reg2d_intensities.Reg2DIntensities method) (ewoksndreg.tasks.reg2d_multistack.Reg2DPostEvaluation method) (ewoksndreg.tasks.reg2d_multistack.Reg2DPreEvaluation method) (ewoksndreg.tasks.reg2d_transform.Reg2DTransform method) (ewoksndreg.tasks.select_slice.SelectSlice method) SGD (ewoksndreg.intensities.types.KorniaOptimizerType attribute) shape (ewoksndreg.io.input_stack.InputStack property) (ewoksndreg.io.input_stack.InputStackHdf5 property) (ewoksndreg.io.input_stack.InputStackNumpy property)

ShiftTransform (class in ewoksndreg.transformation.scikitimage_backend) silx_features (ewoksndreg.features.features.silx_backend.SilxDescriptorFeatures property) SilxDescriptorFeatureMatching (class in ewoksndreg.features.matching.silx_backend) SilxDescriptorFeatureMatching.RegistryId (class in ewoksndreg.features.matching.silx_backend) SilxDescriptorFeatures (class in ewoksndreg.features.features.silx_backend) SilxDescriptorFeatures.RegistryId (class in ewoksndreg.features.features.silx_backend) similarity (ewoksndreg.transformation.types.TransformationType attribute) SimpleITKTransformation (class in ewoksndreg.transformation.simpleitk_backend) SimpleITKTransformation.RegistryId (class in ewoksndreg.transformation.simpleitk_backend) SitkMetricType (class in ewoksndreg.intensities.types) sitkOptimizerIntesityMapping (class in ewoksndreg.intensities.simpleitk_backend) sitkOptimizerIntesityMapping.RegistryId (class in ewoksndreg.intensities.simpleitk_backend) SitkOptimizerType (class in ewoksndreg.intensities.types) skimage_descriptors (ewoksndreg.features.features.scikitimage_backend.SciKitImageDescriptorFeatures property) skimage_keypoints (ewoksndreg.features.features.scikitimage_backend.SciKitImageDescriptorFeatures property) SkimageCorrelationIntensityMapping (class in ewoksndreg.intensities.scikitimage_backend) SkimageCorrelationIntensityMapping.RegistryId (class in ewoksndreg.intensities.scikitimage_backend) smoothness_eval() (in module ewoksndreg.evaluation.eval_metrics) sobel (ewoksndreg.math.filter.FilterType attribute) stack_range_normalization() (in module ewoksndreg.math.normalization) succeeded (ewoksndreg.tasks.example2d_stack.Example2DStack property) (ewoksndreg.tasks.fluo_stack.FluoAllStacks property) (ewoksndreg.tasks.fluo_stack.FluoStack property) (ewoksndreg.tasks.id16b_file_read.ID16BFileRead property) (ewoksndreg.tasks.reg2d_features.Reg2DFeatures property) (ewoksndreg.tasks.reg2d_intensities.Reg2DIntensities property) (ewoksndreg.tasks.reg2d_multistack.Reg2DPostEvaluation property) (ewoksndreg.tasks.reg2d_multistack.Reg2DPreEvaluation property) (ewoksndreg.tasks.reg2d_transform.Reg2DTransform property) (ewoksndreg.tasks.select_slice.SelectSlice property) SUPPORTED_TRANSFORMATIONS (ewoksndreg.intensities.base.IntensityMapping attribute) (ewoksndreg.intensities.kornia_backend.KorniaOptimizationIntensityMapping attribute) (ewoksndreg.intensities.numpy_backend.NumpyCrossCorrelationIntensityMapping attribute) (ewoksndreg.intensities.scikitimage_backend.SkimageCorrelationIntensityMapping attribute) (ewoksndreg.intensities.simpleitk_backend.sitkOptimizerIntesityMapping attribute)

T

taylor (ewoksndreg.math.filter.WindowType attribute) test_apply_coordinate() (in module ewoksndreg.tests.test_transformation_apply) test_apply_transformations() (in module ewoksndreg.tests.test_transformation_apply) test_apply_translation() (in module ewoksndreg.tests.test_transformation_apply) test_center() (in module ewoksndreg.tests.math.test_fft) test_comp_np() (in module ewoksndreg.tests.math.test_fft) test_consistent() (in module ewoksndreg.tests.math.test_fft) test_crop_edges() (in module ewoksndreg.tests.test_crop) test_crop_stack() (in module ewoksndreg.tests.test_crop) test_dirac_delta() (in module ewoksndreg.tests.math.test_fft) test_feature_registration() (in module ewoksndreg.tests.test_feature_registration) test_freq() (in module ewoksndreg.tests.math.test_fft) test_homography_transform_bounding_box() (in module ewoksndreg.tests.test_transformation_numpy) test_homography_transform_coordinates() (in module ewoksndreg.tests.test_transformation_numpy) test_homography_transform_data() (in module ewoksndreg.tests.test_transformation_numpy) test_images() (in module ewoksndreg.tests.test_data) test_img_nmi() (in module ewoksndreg.tests.test_nmi_loss) test_intensity_registration() (in module ewoksndreg.tests.test_intensity_registration) test_intensity_registration_block() (in module ewoksndreg.tests.test_intensity_registration) test_leastsq() (in module ewoksndreg.tests.math.test_fit1d) (in module ewoksndreg.tests.math.test_fit2d) test_linear() (in module ewoksndreg.tests.math.test_fft) test_linfit() (in module ewoksndreg.tests.math.test_fit1d) test_match_keypoints() (in module ewoksndreg.tests.test_match_numpy) test_noisy_metric() (in module ewoksndreg.tests.test_evaluation) test_owexample2d_stack_task() (in module ewoksndreg.tests.test_tasks) test_owexample2d_stack_widget() (in module ewoksndreg.tests.test_tasks) test_owreg2d_apply_multi_task() (in module ewoksndreg.tests.test_tasks) test_owreg2d_apply_multi_widget() (in module ewoksndreg.tests.test_tasks) test_owreg2d_apply_task() (in module ewoksndreg.tests.test_tasks) test_owreg2d_apply_widget() (in module ewoksndreg.tests.test_tasks) test_owreg2d_features_task() (in module ewoksndreg.tests.test_tasks) test_owreg2d_features_widget() (in module ewoksndreg.tests.test_tasks) test_owreg2d_intensities_multi_task() (in module ewoksndreg.tests.test_tasks) test_owreg2d_intensities_multi_widget() (in module ewoksndreg.tests.test_tasks) test_owreg2d_intensities_task() (in module ewoksndreg.tests.test_tasks) test_owreg2d_intensities_widget() (in module ewoksndreg.tests.test_tasks) test_owreg2d_preeval_task() (in module ewoksndreg.tests.test_tasks) test_owreg2d_preeval_widget() (in module ewoksndreg.tests.test_tasks) test_parameter_conversion() (in module ewoksndreg.tests.test_transformation_parameter) test_peak_metric() (in module ewoksndreg.tests.test_evaluation) test_rand_nmi() (in module ewoksndreg.tests.test_nmi_loss) test_reg2d_features_with_qt() (in module ewoksndreg.tests.tutorials.test_reg2d_features) test_reg2d_features_without_qt() (in module ewoksndreg.tests.tutorials.test_reg2d_features)

test_reg2d_intensities_with_qt() (in module ewoksndreg.tests.tutorials.test_reg2d_intensities) test_reg2d_intensities_without_qt() (in module ewoksndreg.tests.tutorials.test_reg2d_intensities) test_rigid_workflow_with_qt() (in module ewoksndreg.tests.workflow_tests.test_sitk_workflow) test_rigid_workflow_without_qt() (in module ewoksndreg.tests.workflow_tests.test_sitk_workflow) test_shift() (in module ewoksndreg.tests.math.test_fft) test_smoothness_metric() (in module ewoksndreg.tests.test_evaluation) test_smoothness_metric_rot() (in module ewoksndreg.tests.test_evaluation) test_smoothness_metric_size() (in module ewoksndreg.tests.test_evaluation) test_solver_affine() (in module ewoksndreg.tests.test_mapping_solvers) test_solver_projective() (in module ewoksndreg.tests.test_mapping_solvers) test_solver_rigid() (in module ewoksndreg.tests.test_mapping_solvers) test_solver_similarity() (in module ewoksndreg.tests.test_mapping_solvers) test_solver_translation() (in module ewoksndreg.tests.test_mapping_solvers) test_sp_multi_with_qt() (in module ewoksndreg.tests.workflow_tests.test_sp_workflows) test_sp_multi_without_qt() (in module ewoksndreg.tests.workflow_tests.test_sp_workflows) test_sp_single_with_qt() (in module ewoksndreg.tests.workflow_tests.test_sp_workflows) test_sp_single_without_qt() (in module ewoksndreg.tests.workflow_tests.test_sp_workflows) test_stack_io_hdf5() (in module ewoksndreg.tests.test_stack_io) test_stack_io_numpy() (in module ewoksndreg.tests.test_stack_io) test_strat_workflow_with_qt() (in module ewoksndreg.tests.workflow_tests.test_strategy) test_strat_workflow_without_qt() (in module ewoksndreg.tests.workflow_tests.test_strategy) test_subregion() (in module ewoksndreg.tests.math.test_fft) test_transformations() (in module ewoksndreg.tests.test_data) test_type_from_matrix() (in module ewoksndreg.tests.test_transformation_types) Transformation (class in ewoksndreg.transformation.base) Transformation.RegistryId (class in ewoksndreg.transformation.base) transformations_from_features() (in module ewoksndreg.features.registration) TransformationType (class in ewoksndreg.transformation.types) translation (ewoksndreg.transformation.scikitimage_backend.ShiftTransform property) (ewoksndreg.transformation.types.TransformationType attribute) triang (ewoksndreg.math.filter.WindowType attribute) tukey (ewoksndreg.math.filter.WindowType attribute) type (ewoksndreg.intensities.base.IntensityMapping property) (ewoksndreg.intensities.kornia_backend.KorniaOptimizationIntensityMapping property) (ewoksndreg.intensities.numpy_backend.NumpyCrossCorrelationIntensityMapping property) (ewoksndreg.intensities.scikitimage_backend.SkimageCorrelationIntensityMapping property) (ewoksndreg.intensities.simpleitk_backend.sitkOptimizerIntesityMapping property) (ewoksndreg.transformation.base.Transformation property) (ewoksndreg.transformation.homography.Homography property) (ewoksndreg.transformation.numpy_backend.NumpyHomography property) (ewoksndreg.transformation.scikitimage_backend.SciKitImageHomography property) (ewoksndreg.transformation.scipy_backend.ScipyHomography property) (ewoksndreg.transformation.simpleitk_backend.SimpleITKTransformation property) type_from_matrix() (in module ewoksndreg.transformation.homography) type_from_transform() (ewoksndreg.transformation.simpleitk_backend.SimpleITKTransformation method)

U

uhash (ewoksndreg.tasks.example2d_stack.Example2DStack property) (ewoksndreg.tasks.fluo_stack.FluoAllStacks property) (ewoksndreg.tasks.fluo_stack.FluoStack property) (ewoksndreg.tasks.id16b_file_read.ID16BFileRead property) (ewoksndreg.tasks.reg2d_features.Reg2DFeatures property) (ewoksndreg.tasks.reg2d_intensities.Reg2DIntensities property) (ewoksndreg.tasks.reg2d_multistack.Reg2DPostEvaluation property) (ewoksndreg.tasks.reg2d_multistack.Reg2DPreEvaluation property) (ewoksndreg.tasks.reg2d_transform.Reg2DTransform property) (ewoksndreg.tasks.select_slice.SelectSlice property) uhash_randomize() (ewoksndreg.tasks.example2d_stack.Example2DStack method) (ewoksndreg.tasks.fluo_stack.FluoAllStacks method) (ewoksndreg.tasks.fluo_stack.FluoStack method) (ewoksndreg.tasks.id16b_file_read.ID16BFileRead method) (ewoksndreg.tasks.reg2d_features.Reg2DFeatures method) (ewoksndreg.tasks.reg2d_intensities.Reg2DIntensities method) (ewoksndreg.tasks.reg2d_multistack.Reg2DPostEvaluation method) (ewoksndreg.tasks.reg2d_multistack.Reg2DPreEvaluation method) (ewoksndreg.tasks.reg2d_transform.Reg2DTransform method) (ewoksndreg.tasks.select_slice.SelectSlice method)

undo_fix_uhash() (ewoksndreg.tasks.example2d_stack.Example2DStack method) (ewoksndreg.tasks.fluo_stack.FluoAllStacks method) (ewoksndreg.tasks.fluo_stack.FluoStack method) (ewoksndreg.tasks.id16b_file_read.ID16BFileRead method) (ewoksndreg.tasks.reg2d_features.Reg2DFeatures method) (ewoksndreg.tasks.reg2d_intensities.Reg2DIntensities method) (ewoksndreg.tasks.reg2d_multistack.Reg2DPostEvaluation method) (ewoksndreg.tasks.reg2d_multistack.Reg2DPreEvaluation method) (ewoksndreg.tasks.reg2d_transform.Reg2DTransform method) (ewoksndreg.tasks.select_slice.SelectSlice method) undo_randomize() (ewoksndreg.tasks.example2d_stack.Example2DStack method) (ewoksndreg.tasks.fluo_stack.FluoAllStacks method) (ewoksndreg.tasks.fluo_stack.FluoStack method) (ewoksndreg.tasks.id16b_file_read.ID16BFileRead method) (ewoksndreg.tasks.reg2d_features.Reg2DFeatures method) (ewoksndreg.tasks.reg2d_intensities.Reg2DIntensities method) (ewoksndreg.tasks.reg2d_multistack.Reg2DPostEvaluation method) (ewoksndreg.tasks.reg2d_multistack.Reg2DPreEvaluation method) (ewoksndreg.tasks.reg2d_transform.Reg2DTransform method) (ewoksndreg.tasks.select_slice.SelectSlice method)

W

WindowType (class in ewoksndreg.math.filter) workflow_id (ewoksndreg.tasks.example2d_stack.Example2DStack property) (ewoksndreg.tasks.fluo_stack.FluoAllStacks property) (ewoksndreg.tasks.fluo_stack.FluoStack property) (ewoksndreg.tasks.id16b_file_read.ID16BFileRead property) (ewoksndreg.tasks.reg2d_features.Reg2DFeatures property) (ewoksndreg.tasks.reg2d_intensities.Reg2DIntensities property) (ewoksndreg.tasks.reg2d_multistack.Reg2DPostEvaluation property) (ewoksndreg.tasks.reg2d_multistack.Reg2DPreEvaluation property) (ewoksndreg.tasks.reg2d_transform.Reg2DTransform property) (ewoksndreg.tasks.select_slice.SelectSlice property)

X

xyremovenan() (in module ewoksndreg.math.fit1d)